Pseudomonas sp. VLB120: PVLB_03220
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Entry
PVLB_03220 CDS
T02897
Name
(GenBank) pseudouridine synthase
KO
K06181
23S rRNA pseudouridine2457 synthase [EC:
5.4.99.20
]
Organism
psv
Pseudomonas sp. VLB120
Brite
KEGG Orthology (KO) [BR:
psv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psv03009
]
PVLB_03220
Enzymes [BR:
psv01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.20 23S rRNA pseudouridine2457 synthase
PVLB_03220
Ribosome biogenesis [BR:
psv03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
PVLB_03220
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
DUF5818
Motif
Other DBs
NCBI-ProteinID:
AGZ33451
UniProt:
A0AAN0QZ55
LinkDB
All DBs
Position
737356..737991
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AA seq
211 aa
AA seq
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MPLPPRSKPRRPSARPAGPRRQPKAPPAEPRLILFNKPFDVLTQFSDGEGRATLKDYIDI
PGVYPAGRLDRDSEGLLLLTNDGGLQARIADPKHKLAKTYWVQVEGEPSDEQLQRLRDGV
ELNDGPTLPAQARRLDEPDLWPRNPPVRFRKSVPTSWLELVIREGRNRQVRRMTAAVGLP
TLRLVRVRIGDWALDGLDQGCWREVAPKLVR
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgcccctgccaccccgttccaagccgcgccgtccctcggcgcggcctgccggtccacgt
cgccaacccaaggcgccgccggccgagccccgcctgatcctgttcaacaagccgttcgac
gtgctgacccagttcagtgacggcgaagggcgtgccaccctcaaggactacatcgacatc
ccgggcgtctatccagccgggcggctggatcgtgacagcgaaggcctgctgctgctgacc
aacgacggtggactgcaagcgcgcatcgccgatccgaagcacaagttggccaaaacctat
tgggtgcaggtcgaaggcgagccgagcgacgagcaattgcagcggctgcgcgacggcgtg
gaactcaacgacgggcccaccttgccagcacaagcgcggcgcctggatgagcctgatctg
tggccgcgcaatccgccggtgcggtttcgcaagagcgtgccgaccagttggctggagctg
gtgattcgcgaggggcgcaaccgccaggtgcggcggatgacggcagcggtagggctgcct
accttgcgtctggtgcgggtacgtattggtgactgggccctggatggcctggaccagggc
tgctggcgcgaggtggcgccaaagctcgtgcgctaa
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