Pseudomonas sp. VLB120: PVLB_03535
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Entry
PVLB_03535 CDS
T02897
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
psv
Pseudomonas sp. VLB120
Brite
KEGG Orthology (KO) [BR:
psv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psv03016
]
PVLB_03535 (truB)
Enzymes [BR:
psv01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
PVLB_03535 (truB)
Transfer RNA biogenesis [BR:
psv03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PVLB_03535 (truB)
Prokaryotic type
PVLB_03535 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PUA_3
Motif
Other DBs
NCBI-ProteinID:
AGZ33514
UniProt:
A0AAN0V8J1
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All DBs
Position
807693..808610
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AA seq
305 aa
AA seq
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MAQVKRIRRNVSGIILLDKPLGFTSNAALQKVRWLLNAEKAGHTGSLDPLASGVLPLCFG
EATKFSQYLLDSDKGYETVMQLGQTTSTGDAEGEVLKTRDVTVGRAEIEAVLPRFRGQIS
QVPPMYSALKRDGQPLYKLARAGEVVEREARSVTIGRLELLECEGTRARLTVGCSKGTYI
RTLVEDIGEALGCGAYVAELRRTQAGPFELAQTVTLEELEQAHAEGGNEALDRFLMPSDS
GLQDWPLVRLSEHSAFYWLHGQAVRAPDAPQFGMVRVQDHNARFIGIGEVSEDGRIAPRR
LIRSE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtggcccaggtcaaacgtattcgccgtaatgtcagcggcatcatcctgctcgacaagcca
ttggggttcacctccaacgccgcgctgcagaaagtccgctggttgctcaatgccgaaaag
gccggtcacaccggtagcctcgacccacttgcctccggcgtactgccgctgtgcttcggt
gaggcgaccaagttctcgcagtacctgctcgattccgacaagggctacgaaacggtcatg
cagctggggcagactaccagcaccggcgatgccgaaggggaagtactcaagactcgcgac
gtgaccgttggtcgcgccgagatcgaggctgtgctgccgcgttttcgtggtcaaatcagc
caggtaccgccgatgtactccgccctcaagcgcgacggccagccgctttacaagctagct
cgtgcaggagaggtagtggagcgcgaggcgcgttctgttactattggccgcttggaattg
ctcgagtgcgaaggcacccgtgcgcgcctgaccgtcggttgcagcaaaggcacctatatc
cgcaccctggtggaggatatcggcgaggccctgggctgtggcgcctatgtcgccgagctg
cgcaggacccaggccgggcccttcgagctggcgcagacggtaacgctcgaagaactcgag
caggcccacgccgaagggggcaacgaagcgctcgatcgcttcctcatgccgtccgacagc
ggcttgcaggactggccgttggtgcgcctgtccgagcacagtgcgttctactggctgcat
gggcaggccgtgcgtgctccggacgcgccgcaattcggcatggttcgggtacaggatcac
aatgcccgcttcatcggtatcggtgaggtgagcgaggacgggcgcattgcgccgcgtcga
ctgattcggtcggaatga
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