Pseudomonas sp. VLB120: PVLB_03680
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Entry
PVLB_03680 CDS
T02897
Name
(GenBank) penicillin-binding protein 1B
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
psv
Pseudomonas sp. VLB120
Pathway
psv00550
Peptidoglycan biosynthesis
psv01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
psv00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PVLB_03680
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
psv01003
]
PVLB_03680
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
psv01011
]
PVLB_03680
Enzymes [BR:
psv01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
PVLB_03680
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
PVLB_03680
Glycosyltransferases [BR:
psv01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
PVLB_03680
Peptidoglycan biosynthesis and degradation proteins [BR:
psv01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
PVLB_03680
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transgly
UB2H
Transpeptidase
UvrB_inter
PBP_1A_C
PBP1_TM
Motif
Other DBs
NCBI-ProteinID:
AGZ33543
LinkDB
All DBs
Position
840957..843278
Genome browser
AA seq
773 aa
AA seq
DB search
MTRTRSPRTPQKRPTGRSRAWLGWALKLSLVGLVIVAGFAVYLDAVVQEKFSGKRWTIPA
KVYARPLELFVGQKLSKNDFLTELDALGYRRESAANGPGAAAVNGNNVDLNTRGFQFYEG
MEPAQFVRVRFSGDYVAGLSGANGGKLDVVRLEPLMIGGIYPKNLEDRILIKIDQVPPYL
LETLVAVEDRDFYSHFGVSPKSIARAMWVNTSSGSMRQGGSTLTQQLVKNFYLTSERSLS
RKLTEAMMAVLLELHYDKREILEAYLNEVFVGQDGQRAVHGFGLASQFFFSQPLSELKLH
QVALLVGMVKGPSYYNPRRYPERALTRRNLVLDLLAEQNVVSKEVAEAAKKMPLGVTKRG
SLADSSFPAFLDLVKRQLRQDYRDEDLTEEGLRIFTSFDPILQMKAESAMSETFKRLAGR
KGADEVESAMVVTNPETGEVQALIGSRQSGFAGFNRAIDAVRPIGSLVKPAVYLTALEQP
TKYTLTSRVQDEPFSVKGADGQVWRPQNYDRRPHGTIYLYQGLANSYNLSTAKIGLEVGV
PNVIKTIGRLGVNVDWPAFPSMLLGAGGMSPMQVATMYQTIANGGFNTPMRGIRSVLTAE
GEPLKRYPFQIQQTFDPGSIYLVQNAMQRVMREGTGRSVYSVLPSSLTLAGKTGTSNDSR
DSWFSGFSQDLLAVVWLGRDDNGKTPFTGATGALQVWTSFMRKADPLPLDMPQPDNVVQA
WIDPYSGQGSDGSCPGAVQMPYIRGSEPPAGATCGGEQDPVESVMDWVKGWMN
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgactcgaactcgatccccccgcacccctcagaaacgcccgaccggccgctcccgcgcc
tggctgggctgggctttgaagctcagcctggttggccttgtgatcgtcgccggcttcgcg
gtttacctcgatgccgtcgtccaggagaagttctctggcaagcgctggaccatcccggcc
aaggtgtatgcccggccgctggagctgttcgtcggacagaaactgagcaagaacgacttc
ctcaccgaactcgatgcgctcggctatcggcgtgagagcgccgccaacggcccaggtgcg
gccgcggtcaatggtaacaacgtcgacctcaatacccgtggcttccagttctacgagggc
atggagccggcccagttcgtgcgcgtgcgtttctccggtgactatgttgcggggctctcc
ggcgccaacggcggcaagctcgatgtggtgcgcctggagcctttgatgatcggcggtatc
tatccgaagaacctcgaagaccgcattctgatcaagatcgaccaggtgccgccgtacctg
ctcgaaaccttggtggcggtggaagaccgcgacttctacagccacttcggcgtatcgccc
aagtcgattgcccgcgccatgtgggtcaacacgtcatccggctccatgcgccagggcggc
agtaccctgacgcagcagttggtgaagaacttctacctgaccagcgagcgcagtctcagc
cgcaagctcaccgaagcgatgatggccgtgctgctggagctgcattacgacaagcgcgaa
attctcgaggcctacctcaacgaagtgttcgttggccaggacggtcaacgtgccgtgcat
ggcttcggcctggccagccagttcttcttcagccagccgctgtcggaactcaagctgcat
caggtcgccttgctggtgggtatggtcaaggggccgtcctactacaacccgcgccgttac
ccggagcgtgcgctgactcgccgtaacctggtgctcgacctgctggccgagcagaacgtg
gtgagcaaggaagtcgccgaagcggccaagaaaatgcccttgggcgtgaccaagcgtggc
agcctggccgacagctcgttcccggccttcctcgacctggtcaagcgtcagctgcgccag
gactaccgcgatgaggacttgaccgaagaaggcctgcgaatcttcaccagcttcgacccg
atcctgcagatgaaggccgagagcgccatgagcgagacgttcaagcgcctggccgggcgc
aagggcgctgatgaggtggagtcggcaatggttgtgaccaacccggaaaccggtgaggtg
caggcgctgatcggcagccgccagtcgggcttcgccggcttcaaccgcgccatcgatgcg
gtgcgtccgattggttcgctggtcaagccagcggtctacctgaccgcgctggagcaaccg
accaagtacaccctgaccagccgcgtgcaggatgagccgttttcggtcaagggcgccgac
ggccaggtatggcgtccgcagaactacgaccgccgcccccatggcaccatctacctgtat
caggggctggccaactcctacaacctgtcgaccgccaagatcggcttggaagtgggggtc
ccgaacgtcatcaagaccattgggcggctgggcgtgaatgtcgattggccagccttccca
tcgatgctgctgggcgccggtgggatgtcgccgatgcaggtcgcgaccatgtaccagacc
atcgccaatggtggcttcaataccccgatgcgcggtattcgcagcgtgctgacggccgaa
ggcgagccgctcaagcgctacccgttccagatccagcagactttcgatccgggctcgatc
tacctggtgcagaacgccatgcagcgagtgatgcgtgaaggtaccggtcgttcggtgtac
agcgtgctgccaagttcgctgaccctggcaggcaagaccgggaccagtaacgattcgcgc
gacagctggttctccggcttcagccaggacctgctggccgtggtctggctgggccgcgac
gataacggcaagacaccgttcactggcgccaccggtgccctgcaggtatggaccagcttc
atgcgcaaggccgacccgctgccgttggacatgccgcagccggacaatgtagtgcaggcc
tggatcgacccgtacagcgggcaaggttccgatggcagctgtccgggagccgtgcagatg
ccgtatattcgcgggagcgaaccgcccgcgggtgcgacctgtggcggtgagcaggatccg
gttgagtcggtcatggactgggtcaagggctggatgaattaa
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