Pseudomonas sp. VLB120: PVLB_03745
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Entry
PVLB_03745 CDS
T02897
Name
(GenBank) diguanylate cyclase
KO
K21021
diguanylate cyclase [EC:
2.7.7.65
]
Organism
psv
Pseudomonas sp. VLB120
Pathway
psv02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
psv00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PVLB_03745
Enzymes [BR:
psv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.65 diguanylate cyclase
PVLB_03745
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GGDEF
CHASE8
HAMP
SPOR
SMP_2
Motif
Other DBs
NCBI-ProteinID:
AGZ33556
LinkDB
All DBs
Position
866715..867956
Genome browser
AA seq
413 aa
AA seq
DB search
MKPGKQRNARPTLRSVLSRGHLSVALLAVGLAGISLTLLGVLALQAYANHNLHLIARSIN
YTVEAAVVFDDSAAANEALALIASTEEVAEAKVFNNDGDQLAHWQRRDDSMLAHLEARVA
TALLDEPINLPIFHQQQKVGHMELVGQGRSLLLFLLSGLGGILCCTLLSAVVALYLSQRM
LGDIVRPLRGLASVAHAARRERSFDRRVPEAPIAELNELGNDFNALLDELEVWHSHLQNE
NQTLAHQASHDSLTGLPNRAFFEGRLNRTVRNAARQGDHLALLFLDSDHFKQINDSLGHA
VGDEVLICVAERVRAQLREHDLVARLGGDEFAVILTPMQSREDAERIAEKIVASMKLPIQ
LDSGSSISTSVSVGIAYYPQDGTDPASLLNAADAAMYQAKRRRRGHWQAAQTE
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgaagcctggcaagcagcgtaatgcacgcccgaccctgcgctcggtgctgagccgtggc
cacctcagcgtggcgttgctggcagtggggctggccggtatatccctgaccctgctcggg
gtgcttgccctgcaagcttatgccaatcacaacctgcacttgattgcccgctcgatcaac
tacaccgtcgaagccgccgtggtgttcgacgacagtgccgcggccaatgaggcgttggcg
ctgatcgccagcaccgaagaggtggccgaggccaaagtcttcaacaacgatggcgatcag
cttgcgcactggcaacgccgcgatgacagcatgcttgcccatctggaagcccgggtggca
actgccttgctggacgaaccgatcaacctgccgatttttcatcagcagcagaaggtgggg
catatggagctggttggccagggccgcagcctgttgttattcctgctcagcggattgggc
ggcattctgtgctgcactctgttgagcgcggtggttgccctttacctgtcgcaacgcatg
ctgggcgacattgtccgcccgctgcgcggcctggccagcgtcgcccatgccgcgcgccgt
gagcgcagtttcgaccgtcgcgtgccggaagcacccattgccgagctcaacgaactgggt
aacgacttcaatgccttgctcgatgaactggaggtctggcacagccacctgcagaacgag
aaccagaccctggcccatcaagccagccacgacagcctcaccggcttgcccaaccgcgcg
ttcttcgaaggccgtctgaaccgcacggtgcgcaatgcggcccgtcagggcgatcacctg
gcactgttgttcctcgatagcgaccatttcaagcagatcaacgacagcctcggccatgcc
gtgggcgacgaagtgctgatctgtgttgccgagcgcgttcgcgcccagttgcgcgaacac
gacttggtggcgcgccttggcggtgatgaattcgccgtgatcctgacaccgatgcagtcg
cgcgaagatgccgagcgcattgccgagaagatcgttgccagcatgaagctgcccatccaa
ctggacagcggcagcagcatcagcacgtcggtgagcgtgggcatcgcttactacccgcaa
gatggcaccgaccctgccagcctcctcaatgccgccgatgcggcgatgtaccaggccaag
cgcaggcgtcggggtcattggcaagcggcgcagacggagtag
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