Pseudomonas sp. VLB120: PVLB_03850
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Entry
PVLB_03850 CDS
T02897
Name
(GenBank) protocatechuate 3,4-dioxygenase subunit beta
KO
K00449
protocatechuate 3,4-dioxygenase, beta subunit [EC:
1.13.11.3
]
Organism
psv
Pseudomonas sp. VLB120
Pathway
psv00362
Benzoate degradation
psv01100
Metabolic pathways
psv01120
Microbial metabolism in diverse environments
psv01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
psv00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
PVLB_03850
00624 Polycyclic aromatic hydrocarbon degradation
PVLB_03850
Enzymes [BR:
psv01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.3 protocatechuate 3,4-dioxygenase
PVLB_03850
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GFIT
Motif
Pfam:
Dioxygenase_C
PCDO_beta_N
CarboxypepD_reg
DUF4198
Ig_DR_A0283-like
SdrD_B
Motif
Other DBs
NCBI-ProteinID:
AGZ33577
UniProt:
A0AAN0V8L4
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All DBs
Position
889592..890311
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AA seq
239 aa
AA seq
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MPAQDNSRFVIRDRNWHPKALTPDYKTSVARSPRQALVSIPQSISETTGPDFSHLGFGPH
DHDLLLNFNNGGLPIGERIIVSGRVVDQYGKPVPNTLVEMWQANAGGRYRHKNDRYLAPL
DPNFGGVGRCLTDRDGYYSFRTIKPGPYPWRNGPNDWRPAHIHFSISGPSIATKLITQLY
FEGDPLIPMCPIVKSIANPEAVQQLIAKLDMSNANPMDCLAYRFDIVLRGQRKTHFENC
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgcccgctcaggacaacagccgcttcgtgatccgtgatcgcaactggcaccccaaggcc
ctcacgcccgactacaagacgtccgttgcccgctctccgcgccaggctctggtcagtatt
ccgcagtcgatcagcgaaaccaccggtccggacttttcccacctgggctttggcccgcac
gaccatgacctgctgctgaacttcaacaatggtggcctgccgatcggcgagcgcatcatc
gtgtccggccgcgtcgtcgaccagtacggcaagcctgtgccgaacaccctggtcgagatg
tggcaagccaacgccggtggtcgctaccggcacaagaacgaccgttacctggcgccgctg
gacccgaacttcggtggtgtcggccgctgcctgaccgaccgtgacggctactacagcttc
cgcaccatcaagcccggtccgtacccatggcgcaacggcccgaacgactggcgtccggcg
cacatccacttctccatcagcggcccgtcgattgccaccaaactgatcacccagctgtac
ttcgaaggtgatccgttgattccgatgtgcccgatcgtcaagtcgatcgccaaccccgaa
gccgtgcagcagttgatcgccaagctcgacatgagcaacgccaaccccatggactgcctg
gcgtaccgcttcgacatcgtgctgcgtggccagcgcaagacccacttcgagaactgctga
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