Pseudomonas sp. VLB120: PVLB_03910
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Entry
PVLB_03910 CDS
T02897
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
psv
Pseudomonas sp. VLB120
Brite
KEGG Orthology (KO) [BR:
psv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psv03400
]
PVLB_03910
DNA repair and recombination proteins [BR:
psv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PVLB_03910
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
Lon_C
DUF7125
AAA_16
DnaB_C
GvpD_P-loop
AAA_22
Rad51
SLFN-g3_helicase
AAA
RecA_N
nSTAND_NTPase5
nSTAND3
AAA_14
AAA_24
NTPase_1
MCM
ABC_tran
zf-C2H2_6
DUF7129
Motif
Other DBs
NCBI-ProteinID:
AGZ33589
LinkDB
All DBs
Position
901469..902836
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AA seq
455 aa
AA seq
DB search
MAKAKRLYGCTECGATFPKWAGQCGECGAWNTLVETMIESGGAAAPSGRTGWAGQQAQIK
TLAEVSVEEIPRFTTSSAELDRVLGGGLVDGSVVLIGGDPGIGKSTILLQTLCNIATSMP
ALYVTGEESQQQVAMRSRRLGLPQDQLKVMTETCIETIIATARVEKPRVMVIDSIQTIFT
EQLQSAPGGVAQVRESAALLVRYAKQSGTAIFLVGHVTKEGSLAGPRVLEHMVDTVLYFE
GESDGRLRLLRAVKNRFGAVNELGVFGMTDRGLKEVSNPSAIFLNRAQEEVPGSVVMATW
EGTRPMLVEVQALVDDSHLANPRRVTLGLDQNRLAMLLAVLHRHGGIPTHDQDVFLNVVG
GVKVLETASDLALLAAVMSSLRNRPLAHGLLVFGEIGLSGEVRPVPSGQERLKEAAKHGF
KRAIVPKGNAPKEAPAGLQIIAVTRLEQALDALFE
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggccaaggccaagcgcttgtatggctgcaccgagtgcggcgcgaccttccccaaatgg
gccggccagtgcggtgagtgtggggcctggaacaccctggtcgaaaccatgatcgaaagc
ggcggtgcagctgcaccgagtggccgtacgggatgggctgggcagcaggctcagatcaag
accctggccgaagtcagcgtcgaggaaatcccgcgtttcaccaccagcagcgctgagctt
gaccgcgtactgggtggcggtctggtggacggctcggtggtgctgatcgggggcgatccg
ggtatcggcaagtcgaccatcctgctgcagaccctgtgcaacattgccacgtccatgcct
gctctatacgtcacgggcgaagagtcccagcaacaggtggccatgcgctcgcgacgcctg
ggcttgccgcaggaccagctcaaggtgatgaccgagacgtgcatcgagaccatcatcgcc
actgcgcgcgtggaaaagcctcgggtgatggtgatcgactcgatccagaccattttcacc
gagcaattgcagtcggcccccggtggcgtggctcaggtgcgcgagagtgcggcgttgctg
gtgcgctatgccaagcaaagtggaaccgcgattttcctggtcgggcacgtcaccaaggaa
ggttcgctggctggcccacgggtactggagcacatggtcgacaccgtgctgtatttcgag
ggtgagtccgatggccgactgcgtttgttgcgggcggtgaagaatcgcttcggcgcggtc
aacgaactgggcgtgttcggcatgaccgaccgtggcctgaaggaagtctccaacccgtcg
gcgattttcctcaaccgcgcccaggaagaagtgccgggcagtgtggtcatggctacctgg
gaaggcacccggccgatgctggtggaagtgcaggcattggtcgacgacagccacctggcc
aacccgcgccgggtcaccctgggcctggaccagaaccgcctggcgatgttgctggcagtg
ttgcatcgtcatggcggtatccctacgcacgatcaggatgtgttccttaacgtggtgggt
ggggtcaaggtgctggagacagcctccgacctggccttgttggcggcggtgatgtccagc
ttgcgcaatcgcccgcttgcccatggcttgctggtattcggtgaaatcggcctgtccggc
gaggttcgcccggtgcccagtggccaggaacgcctgaaagaggcggccaagcatggcttc
aagcgcgccatcgtgcccaagggcaatgcgccgaaggaggcgccggcaggattgcagata
attgcagtgacacgcctggaacaggcgctggacgcacttttcgagtag
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