Pseudomonas sp. VLB120: PVLB_04630
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Entry
PVLB_04630 CDS
T02897
Symbol
groEL1
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
psv
Pseudomonas sp. VLB120
Pathway
psv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PVLB_04630 (groEL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psv03019
]
PVLB_04630 (groEL1)
03110 Chaperones and folding catalysts [BR:
psv03110
]
PVLB_04630 (groEL1)
03029 Mitochondrial biogenesis [BR:
psv03029
]
PVLB_04630 (groEL1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psv04147
]
PVLB_04630 (groEL1)
Enzymes [BR:
psv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
PVLB_04630 (groEL1)
Messenger RNA biogenesis [BR:
psv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
PVLB_04630 (groEL1)
Chaperones and folding catalysts [BR:
psv03110
]
Heat shock proteins
HSP60 / Chaperonin
PVLB_04630 (groEL1)
Mitochondrial biogenesis [BR:
psv03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
PVLB_04630 (groEL1)
Exosome [BR:
psv04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
PVLB_04630 (groEL1)
Exosomal proteins of other body fluids (saliva and urine)
PVLB_04630 (groEL1)
Exosomal proteins of breast cancer cells
PVLB_04630 (groEL1)
Exosomal proteins of colorectal cancer cells
PVLB_04630 (groEL1)
Exosomal proteins of bladder cancer cells
PVLB_04630 (groEL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF5891
Motif
Other DBs
NCBI-ProteinID:
AGZ33733
LinkDB
All DBs
Position
1052759..1054399
Genome browser
AA seq
546 aa
AA seq
DB search
MAAKDVKFGDSARKKMLVGVNVLADAVKATLGPKGRNVVLAKSFGAPTITKDGVSVAKEI
ELKDAFENMGAQLVKEVASKANDAAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGI
DKATAAIVAELKNLSKPCADSKAIAQVGTISANSDTSIGEIIAEAMEKVGKEGVITVEEG
SGLENELSVVEGMQFDRGYLSPYFVNKPDTMVAELEGPLLLLVDKKISNIRELLPVLEAV
AKAGRPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGQV
ISEEIGLTLETTTLEHLGNAKRVILSKENTTIIDGAGADADIEARVKQIRAQIEETSSDY
DREKLQERLAKLAGGVAVIKVGAGTEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALV
RALQAVADLKGDNEDQNVGIALLRRSVEAPLRQITANAGDEPSVVADKVKQGSGNYGYNA
ATGEYGDMIEMGILDPAKVTRSALQAAASIGGLMITTEAMVADLPEDKPAAGMPDMGGMG
GMGGMM
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaaagacgtaaaattcggcgattccgcccgtaagaaaatgctggttggcgtc
aacgttctggctgacgcggtaaaagcgaccctgggcccgaaaggccgtaacgttgtcctg
gccaagagcttcggcgctccgaccatcaccaaagacggtgtttcggttgccaaggaaatc
gaactgaaagacgccttcgaaaacatgggcgcccagttggtcaaagaagtggcttccaag
gccaacgacgctgccggtgacggcaccaccaccgccaccgttctggctcaggccatcgtc
aacgaaggcctgaaggccgtcgctgccggcatgaacccgatggacctcaagcgcggcatc
gacaaggccaccgctgccatcgtcgccgagctgaagaacctgtccaagccatgcgctgac
tccaaggccatcgcccaggtaggtaccatctccgccaactccgacacctccatcggtgaa
atcatcgccgaagccatggaaaaagtcggcaaagaaggcgtgatcaccgttgaagaaggc
tcgggcctggaaaacgaactgtccgtcgtagaaggcatgcagttcgaccgtggctacctg
tcgccgtacttcgtcaacaagccagacaccatggttgccgagctggaaggcccgctgctg
ctgctggtcgacaagaagatctccaacatccgcgagctgctgccagttctggaagccgtt
gccaaggccggccgtcctctgctgatcgttgccgaagacgtcgaaggcgaagccctggct
accctggtggtcaacaacatgcgcggtatcgtcaaggttgctgcggtcaaggcacctggc
ttcggcgaccgccgcaaggccatgctgcaggacatcgccaccctgactggcggccaggtc
atctccgaagaaatcggtctgaccctggaaaccactaccctggagcacctgggtaacgcc
aagcgcgtcatcctgtccaaggaaaacaccaccatcatcgacggcgctggcgccgacgct
gacatcgaagcacgcgtcaagcagatccgtgcccagatcgaagaaacctcttcggactac
gaccgtgagaagctgcaagagcgtctggccaaactggctggcggtgttgccgtgatcaag
gtcggtgctggcaccgaagttgaaatgaaagagaagaaagcccgcgtcgaagacgccctg
cacgctacccgtgcagccgtcgaagaaggcgtagtgcctggcggtggtgttgcgctggtt
cgcgccctgcaagccgttgccgacctcaagggcgacaacgaagaccagaacgtcggtatc
gcgctgctgcgccgttcggtcgaagcgccgctgcgccagatcactgccaacgccggcgac
gagccaagcgttgtcgctgacaaggttaagcaaggttcgggcaactacggctacaacgct
gctactggcgaatacggcgacatgatcgagatgggtatcctggacccagccaaggtcacc
cgttcggctctgcaagctgcagcttcgatcggcggtctgatgatcaccaccgaagccatg
gttgctgacctgccggaagacaagccagctgctggcatgcctgacatgggcggcatgggt
ggcatgggcggcatgatgtaa
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