Pseudomonas sp. VLB120: PVLB_05065
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Entry
PVLB_05065 CDS
T02897
Name
(GenBank) pseudouridine synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
psv
Pseudomonas sp. VLB120
Brite
KEGG Orthology (KO) [BR:
psv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psv03009
]
PVLB_05065
Enzymes [BR:
psv01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
PVLB_05065
Ribosome biogenesis [BR:
psv03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
PVLB_05065
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
DUF5818
Motif
Other DBs
NCBI-ProteinID:
AGZ33820
LinkDB
All DBs
Position
complement(1151856..1152548)
Genome browser
AA seq
230 aa
AA seq
DB search
MRLDRFLANLPDYNRQQVRRLLAQRRVRVNGEVAHDPLLEVNDFSRIEVDDKLLQAGYPA
RYLMLHKPTGCVSATQDPRHRTVLDLLPAEQRDGLHIAGRLDYNTTGLMILTNDGQWSRR
LTQPRTKLPKRYLVETEDEIGDHYVARFREGFYFAFENLTTLPAQLDILGPRQARLAIVE
GRYHQVKRMFGHFDNKVVGLHRESMGPIQLDPALEPGAFRALTAEEIASV
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgcgacttgaccgtttcctcgccaatctccccgactacaaccgtcagcaggtgcgacga
ctgctggcacaacgacgtgtgcgagtgaatggcgaggtggcgcatgacccactgctggaa
gtgaacgacttcagccgcatcgaagtggacgacaagttgcttcaggcaggctacccggct
cgctacctgatgctgcacaagcccaccggttgcgtcagcgccacacaggaccctcggcac
cgcacggtgctggacctgctacccgccgagcagcgagacggcttgcacatcgccggacgc
ctggactacaacaccaccggcctgatgatcctgaccaatgacggccaatggtcgagacga
ctcacccagcccaggaccaaactgcccaaacgctacctggtcgagaccgaggacgagatc
ggcgaccactatgtcgccaggttccgggaaggcttctacttcgccttcgaaaacctcacc
accctgcctgcccaactggacatcctcggcccgcggcaggcccggctggcaatcgtcgaa
ggacgttaccaccaggtcaagcgcatgttcgggcacttcgacaacaaggtcgtggggctg
caccgggaaagcatggggccgattcaactggacccagcccttgagccaggggcgttcagg
gcgctgacagccgaggaaatcgcctcggtctag
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