Pseudomonas sp. VLB120: PVLB_05185
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Entry
PVLB_05185 CDS
T02897
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
psv
Pseudomonas sp. VLB120
Pathway
psv03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
psv00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PVLB_05185 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psv03019
]
PVLB_05185 (rnc)
03009 Ribosome biogenesis [BR:
psv03009
]
PVLB_05185 (rnc)
03036 Chromosome and associated proteins [BR:
psv03036
]
PVLB_05185 (rnc)
Enzymes [BR:
psv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
PVLB_05185 (rnc)
Messenger RNA biogenesis [BR:
psv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PVLB_05185 (rnc)
Ribosome biogenesis [BR:
psv03009
]
Eukaryotic type
90S particles
RNase
PVLB_05185 (rnc)
Prokaryotic type
rRNA processing factors
PVLB_05185 (rnc)
Chromosome and associated proteins [BR:
psv03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
PVLB_05185 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
EML_helical
Motif
Other DBs
NCBI-ProteinID:
AGZ33844
LinkDB
All DBs
Position
1176370..1177059
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AA seq
229 aa
AA seq
DB search
MSASLTRLERKLGYTFKNQEQMLLALTHRSYAGRNNERLEFLGDAILNFVVGEALFERFP
QAREGQLSRLRARLVKGETLARLARGFDLGEYLRLGSGELKSGGFRRESILADALEALIG
AIYLDADMQTARERILDWLTDEFDGLTLVDTNKDPKTRLQEFLQSRACELPRYEVVDIQG
EPHCRTFFVECEVVLLNNKSRGQGVSRRIAEQVAAASALIALGVENGND
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcttcccttacccgtctggagcgaaagctcggatacaccttcaagaaccaggag
cagatgctgctggccctgacccatcgcagctatgccgggcgcaacaacgagcgcctggag
ttcctcggcgacgccattctcaacttcgtggtgggcgaggcgctgttcgagcgcttcccc
caggcccgcgaaggccagctgtcgcgcctgcgagcccgcctggtcaagggtgagaccctg
gcccgcctggcccgaggcttcgacctgggtgaatacctgcgcctagggtcgggtgagctc
aaaagtggcggtttccgccgtgagtcgatcctggccgatgccctggaagcgctgattggc
gcgatctacctggatgcggacatgcagaccgcccgtgagcgcattctcgactggctcacc
gacgagttcgatggcttgaccctggtcgataccaacaaggaccccaagacccgcctgcag
gaattcctgcagtcgcgtgcctgcgagctgccgcgttacgaagtggtggacatccagggc
gaaccgcactgccgcacgttcttcgtcgaatgcgaagtggtgctgctgaataacaagagc
cgcggccagggcgtgagtcggcgtatcgccgaacaggtcgccgccgcctctgcattgatc
gccctgggcgtggagaatggcaatgactga
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