Pseudomonas sp. VLB120: PVLB_06300
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Entry
PVLB_06300 CDS
T02897
Name
(GenBank) extracellular solute-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
psv
Pseudomonas sp. VLB120
Pathway
psv02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
psv00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PVLB_06300
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psv02000
]
PVLB_06300
Transporters [BR:
psv02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
PVLB_06300
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_6
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
AGZ34067
LinkDB
All DBs
Position
complement(1426502..1427560)
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AA seq
352 aa
AA seq
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MKKFFMASLLGSAIAFCTSAMAADLKALEEAARKEGTVNSVGMPDAWANWKGTWEDLASK
YGLKHSDTDMSSAQEIAKFEAEKDNASADIGDVGAAFGPIATTKGVTQPYKPSTWDQVPE
WAKDKDGHWALAYTGTIAFIINKDLVKEGERPTSWHDLEKGKYKVAIGDVGTAAQAANGV
LAAAIAYKGDESNLAPGLQLFTKLAQQKRLSLANPTIQTLEKGEVEVGVVWDFNGLSYRE
QIDPKRFEVLIPSDGSVISGYTTIINKYAKHPNAAKLAREYIFSDAGQINLAKGHARPIR
AEHLKLPEDVQAKLLPNEQYKAAQPIKNAEAWEATSKKLPQMWQEQVIIEME
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagttcttcatggcgtcactgctcggttcggccatcgcgttttgcacctcggcc
atggccgcggacctcaaggccctggaagaggccgcccgcaaggaaggcaccgtcaacagc
gtgggcatgcccgatgcctgggccaactggaaaggcacctgggaagacctggccagtaag
tacggtctcaagcacagcgacaccgacatgagctcggcccaggaaatcgccaagttcgaa
gccgaaaaggacaacgccagcgccgacattggtgacgtcggggccgccttcggccccatc
gccaccaccaagggcgtaacccaaccctacaaaccaagcacctgggaccaggtaccggag
tgggccaaggacaaggacggccactgggccctggcctataccggcaccattgcgttcatc
atcaacaaggacctggtgaaggaaggcgaacgcccaacctcctggcatgacctggaaaaa
ggcaagtacaaggtcgccatcggcgacgtcggtaccgcggcccaagcggccaacggcgtg
ctggctgcggcgattgcctacaaaggcgacgagagcaatctggccccgggcctgcaactg
ttcaccaagctggcccagcagaaacgcctgtcgctggccaacccgaccatccagaccctg
gagaagggcgaggtggaagtgggcgtggtatgggacttcaatggtctgagctaccgcgag
cagatcgaccccaagcgtttcgaagtgctgataccgtccgatggctcggtgatttccggc
tacaccacgatcatcaacaagtacgccaagcaccccaacgccgccaagctggcgcgtgaa
tacatcttcagcgatgccgggcagatcaacctggccaagggccatgcacggccgatccgt
gccgagcacctgaagctgccggaagatgtgcaggccaagttgctgccgaacgagcagtac
aaggcggcccagccaatcaagaacgccgaggcctgggaggcgacttcgaagaaactgccg
cagatgtggcaggaacaagtgatcatcgagatggagtga
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