Pseudomonas sp. VLB120: PVLB_07655
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Entry
PVLB_07655 CDS
T02897
Name
(GenBank) OmpF family protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
psv
Pseudomonas sp. VLB120
Brite
KEGG Orthology (KO) [BR:
psv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psv02000
]
PVLB_07655
Transporters [BR:
psv02000
]
Other transporters
Pores ion channels [TC:
1
]
PVLB_07655
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OprF
OmpA
OMP_b-brl
OmpW
DUF748
TSP_3
Motif
Other DBs
NCBI-ProteinID:
AGZ34331
UniProt:
A0AAN0R0X6
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All DBs
Position
1729413..1730450
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AA seq
345 aa
AA seq
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MKLKNTLGLAIGSLVAATSFGALAQGQGAVEIEGNVTKQYYDSERNFKNDGTNPGVRLGY
FLTDDVSLDLGYNETHNARGEVFNKDIKGSKTKLDATYHFGTVGDALRPYVSAGFAHESL
GQATRSGRDHSTFANVGAGAKWYITDMFFARAGVEAMYNIDNGNTEWGPTVGLGLNFGGS
GGKVAAAPAPVAEVCSDSDNDGVCDNVDKCPDTPANVTVDADGCPAVAEVVRVELDVKFD
FDKSVVKPNSYGDIKNLADFMKQYPQTTTVVEGHTDSVGPDAYNQKLSERRANAVKQVLT
QQYGVESSRVDSVGYGETRPVADNATEEGRAINRRVEAQVEAQAK
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgaaattgaaaaacaccttgggcttggccattggctcgctcgtagctgctacttcgttc
ggtgctctggcccaaggccaaggcgctgtcgaaatcgaaggcaacgtcaccaagcagtac
tacgacagcgagcgtaacttcaagaacgacggcaccaatcctggtgttcgcctgggttac
ttcctgaccgacgacgtctccctggatctgggttacaacgagactcacaacgctcgtggc
gaagtcttcaacaaggacatcaagggttccaagaccaagctcgacgctacctaccacttc
ggtaccgtaggcgatgctctgcgtccgtacgtctctgccggtttcgctcacgagagcctg
ggtcaggctacccgtagcggccgtgaccactccaccttcgccaacgttggcgctggcgcc
aagtggtacatcaccgacatgttcttcgcccgtgctggcgttgaagccatgtacaacatc
gacaacggcaacaccgagtggggtccgaccgttggtctgggtctgaacttcggtggtagc
ggtggcaaggttgccgcagcgcctgctccagttgccgaagtctgctccgacagcgacaac
gacggtgtttgcgacaacgtcgacaagtgccctgacaccccggccaacgttaccgttgac
gccgacggctgcccggctgttgccgaagtcgttcgcgttgagctggacgtcaagttcgac
ttcgacaagtcggtcgtcaagccaaacagctacggcgacatcaagaacctggctgacttc
atgaagcagtacccacagaccaccaccgtggttgaaggtcacactgactccgtgggccca
gacgcttacaaccagaagctgtccgagcgtcgcgccaacgctgtcaagcaggtcctgacc
cagcagtacggcgtagaatccagccgtgttgactcggttggctacggcgaaacccgtccg
gttgccgacaacgccaccgaagaaggccgcgctatcaaccgtcgcgttgaagctcaggta
gaagcccaggccaagtaa
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