KEGG   Pseudomonas sp. VLB120: PVLB_07890
Entry
PVLB_07890        CDS       T02897                                 
Symbol
fadB
Name
(GenBank) multifunctional fatty acid oxidation complex subunit alpha
  KO
K01825  3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
Organism
psv  Pseudomonas sp. VLB120
Pathway
psv00071  Fatty acid degradation
psv00280  Valine, leucine and isoleucine degradation
psv00310  Lysine degradation
psv00362  Benzoate degradation
psv00380  Tryptophan metabolism
psv00410  beta-Alanine metabolism
psv00640  Propanoate metabolism
psv00650  Butanoate metabolism
psv00907  Pinene, camphor and geraniol degradation
psv00930  Caprolactam degradation
psv01100  Metabolic pathways
psv01110  Biosynthesis of secondary metabolites
psv01120  Microbial metabolism in diverse environments
psv01200  Carbon metabolism
psv01212  Fatty acid metabolism
Module
psv_M00087  beta-Oxidation
psv_M00957  Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:psv00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00640 Propanoate metabolism
    PVLB_07890 (fadB)
   00650 Butanoate metabolism
    PVLB_07890 (fadB)
  09103 Lipid metabolism
   00071 Fatty acid degradation
    PVLB_07890 (fadB)
  09105 Amino acid metabolism
   00280 Valine, leucine and isoleucine degradation
    PVLB_07890 (fadB)
   00310 Lysine degradation
    PVLB_07890 (fadB)
   00380 Tryptophan metabolism
    PVLB_07890 (fadB)
  09106 Metabolism of other amino acids
   00410 beta-Alanine metabolism
    PVLB_07890 (fadB)
  09109 Metabolism of terpenoids and polyketides
   00907 Pinene, camphor and geraniol degradation
    PVLB_07890 (fadB)
  09111 Xenobiotics biodegradation and metabolism
   00362 Benzoate degradation
    PVLB_07890 (fadB)
   00930 Caprolactam degradation
    PVLB_07890 (fadB)
Enzymes [BR:psv01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.35  3-hydroxyacyl-CoA dehydrogenase
     PVLB_07890 (fadB)
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.17  enoyl-CoA hydratase
     PVLB_07890 (fadB)
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.2  Acting on hydroxy acids and derivatives
    5.1.2.3  3-hydroxybutyryl-CoA epimerase
     PVLB_07890 (fadB)
  5.3  Intramolecular oxidoreductases
   5.3.3  Transposing C=C bonds
    5.3.3.8  Delta3-Delta2-enoyl-CoA isomerase
     PVLB_07890 (fadB)
SSDB
Motif
Pfam: 3HCDH_N ECH_1 3HCDH ECH_2 NAD_binding_2 NfeD1b_N SDH_protease
Other DBs
NCBI-ProteinID: AGZ34378
UniProt: A0AAN0R0X9
LinkDB
Position
1785994..1788141
AA seq 715 aa
MIYEGKAITVKALESGIVELKFDLKGESVNKFNRLTLDELRQAVDAIKADASVKGVIVSS
GKDVFIVGADITEFVENFKLPEAELVAGNLEANRIFNAFEDLEVPTVAAINGIALGGGLE
MCLAADYRIMSSSAKIGLPEVKLGIYPGFGGTVRLPRLIGSDNAIEWIASGKENRADDAL
KVGAVDAVVAPELLQAGALDLIKRAISGELDYKAKRQPKLEKLKLNAIEQMMAFETAKGF
VAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFAKLARTSVAESLVGLFLNDQEL
KRKAKAHDEIAHDVKQAAVLGAGIMGGGIAYQSAVKGTPILMKDIREEAIQLGLNEASKL
LGKRVEKGRLTPAKMAEALNAIRPTLSYGDFANVDIVVEAVVENPKVKQAVLAEVESQVK
EDAILASNTSTISINLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSDVAVATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKVMEKFGWPMGPAYL
MDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAVDALYEANRLGQKNGKGFYAYETDKRGKP
KKVADSSVLDVLKPIVFEAREVSDEDIINWMMIPLCLETVRCLEDGIVETAAEADMGLVY
GIGFPPFRGGALRYIDSIGVAEFVALADQYADLGPLYHPTAKLREMAKNGQRFFN
NT seq 2148 nt   +upstreamnt  +downstreamnt
atgatttacgaaggtaaagccatcacggttaaggctcttgaaagcggcatcgtcgaactg
aagttcgacctcaagggtgagtccgtcaacaagttcaatcgcctgaccctggacgagctg
cgccaggccgtcgacgccatcaaggccgacgcctcggtgaaaggcgtgatcgtcagcagt
ggcaaggacgtgttcatcgtcggcgccgacatcaccgaattcgtcgagaacttcaagctg
cccgaggccgaactggttgccggcaacctggaagccaaccgcatcttcaatgccttcgaa
gacctcgaagtaccgacggtcgcggccatcaacggcatcgccctgggtggcggcctggaa
atgtgcctggcggccgattaccgcatcatgtcctccagcgccaagatcggtctgccagag
gtcaagctgggtatctatcctggcttcggtggtaccgtgcgcctgccgcgcctgatcggc
tccgacaacgccatcgagtggattgcctcgggcaaggaaaaccgtgccgatgacgcgctg
aaagtcggtgcggtcgatgccgtggtcgcccctgaactgctgcaggccggggccctggac
ctgatcaagcgcgccatcagcggcgagctggactacaaggccaagcgccaaccgaagctc
gagaagctcaagctcaatgccatcgagcagatgatggccttcgaaaccgccaaaggcttc
gtggccgggcaggccggcccgaactatccggctccggtcgaagccatcaagaccatccag
aaagccgccaacttcggccgcgacaaagcgctggaagtcgaggccgcaggtttcgccaag
ctggcccgtacctcggtcgccgaaagcctggtcggcctgttcttgaacgatcaggagctc
aagcgcaaggccaaggcccatgatgaaatcgcccacgacgtgaagcaggctgccgtgctc
ggcgccggcatcatggggggtggtatcgcttatcagtcggcggtcaaaggtaccccgatc
ctgatgaaggatattcgcgaggaagccatccagctgggcctgaacgaggcttccaagctg
ctcggcaagcgtgtcgagaaaggccgcctgaccccggcgaaaatggcggaggcgctcaac
gccattcgtccgacgctgtcctacggcgacttcgccaacgtcgacatcgtggtcgaagcc
gttgtcgagaacccgaaggtcaagcaggctgtattggccgaagtcgaaagccaggtgaag
gaagatgcgatcctcgcctccaacacctcgaccatctccatcaacttgttggccaaggcc
ctcaagcgtccagagaacttcgtcggcatgcactttttcaacccggtgcacatgatgccg
ctggtggaagtgattcgtggcgagaaatccagcgatgtagcggtcgccaccaccgtggcg
tacgccaagaagatgggcaagaacccgatcgtggtcaacgactgccccggcttcctggtc
aatcgcgtgctgttcccgtatttcggcggcttcgccaagctggtcagcgccggtgtcgac
ttcgtgcgcatcgacaaggtcatggagaagttcggctggcccatggggccggcgtacctg
atggacgtcgtcggcatcgacaccggccaccacggccgtgacgtaatggccgaaggcttc
ccggaccgcatgaaagatgaccgtcgctcggccgtcgatgcgctctacgaggccaaccgt
ctcggccagaagaacggcaagggcttctacgcctacgaaaccgacaagcgcggcaaaccg
aagaaagtggccgacagcagcgtgctcgacgtcctcaagccgatcgtgttcgaagcgcgt
gaagtcagcgacgaagacatcatcaactggatgatgatcccgctgtgcctcgaaaccgtg
cgctgcctggaagatggcatcgtcgaaaccgccgccgaagccgacatgggcctggtctat
ggcattggcttccctcccttccgtggtggtgcgctgcgttacatcgattcgatcggggtg
gccgagttcgttgccctggctgaccaatatgccgacctcggaccgctgtaccacccgacc
gcgaagctgcgcgagatggccaagaatggccagcgcttcttcaactga

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