Pseudomonas sp. VLB120: PVLB_08620
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Entry
PVLB_08620 CDS
T02897
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
psv
Pseudomonas sp. VLB120
Pathway
psv03030
DNA replication
psv03430
Mismatch repair
psv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PVLB_08620
03430 Mismatch repair
PVLB_08620
03440 Homologous recombination
PVLB_08620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psv03032
]
PVLB_08620
03400 DNA repair and recombination proteins [BR:
psv03400
]
PVLB_08620
Enzymes [BR:
psv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PVLB_08620
DNA replication proteins [BR:
psv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PVLB_08620
DNA repair and recombination proteins [BR:
psv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PVLB_08620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AGZ34524
LinkDB
All DBs
Position
1961302..1962060
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AA seq
252 aa
AA seq
DB search
MEQQQDTRLVILDTETTGMPVSEGHRIIEIGCVEVIGRRLTGRHFHVYLQPDRESDEGAI
GVHGITDAFLVGKPRFADVAEEFFEFIQGATLVIHNAAFDVGFINNEFALLGQHDRADIS
QHCTILDTLLLARARHPGQRNSLDALCKRYDIDNSGRELHGALLDSELLADVYLAMTGGQ
TSLSLAGHGGDNDQQGQGGAGSEIRRITGRAPGRVIMATAEELEAHAERLAAIAKSAGGP
AMWQVLTETPAG
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
gtggagcagcagcaagataccaggctggtcattctcgataccgaaaccaccggcatgccg
gtgagcgaaggccatcgaatcatcgagatcggctgtgtcgaggtcatcggccggcgcctg
accgggcgccacttccacgtctatctgcaacctgatcgcgagagtgacgagggcgccatt
ggcgttcacggtatcaccgatgccttcctcgtcggcaagccgcgttttgccgatgtggcc
gaggagttcttcgagttcatccagggcgccacgctggtcatccacaacgcggcgttcgac
gtaggcttcatcaacaacgaattcgccttgctcgggcagcacgaccgcgctgatatctcc
cagcactgcaccatccttgacaccctgttgctggcccgtgcccgtcatccagggcagcgc
aacagcctcgatgcgttgtgcaaacgctacgacatcgacaactcaggccgtgaattgcac
ggcgccttgctcgactcggaactgctggctgacgtctacctggcgatgacgggtggccaa
accagcctgtcactggcaggccatggtggcgataacgatcagcaggggcagggcggtgct
ggcagcgagattcgccgcattaccgggcgcgcgccggggcgggtgatcatggccactgcc
gaggaactggaagcccatgccgagcggttggcggcaatcgccaagtcggcgggcgggccg
gcgatgtggcaggtattgacggaaacgcctgccgggtaa
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