Pseudomonas sp. VLB120: PVLB_09890
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Entry
PVLB_09890 CDS
T02897
Name
(GenBank) hypothetical protein
KO
K11895
type VI secretion system protein ImpH
Organism
psv
Pseudomonas sp. VLB120
Pathway
psv02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
psv00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PVLB_09890
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
psv02044
]
PVLB_09890
Secretion system [BR:
psv02044
]
Type VI secretion system
Imp/Vas secretion system core components
PVLB_09890
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
T6SS_TssG
HalOD2
Motif
Other DBs
NCBI-ProteinID:
AGZ34774
UniProt:
A0AA86AD91
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All DBs
Position
2169344..2170351
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AA seq
335 aa
AA seq
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MDTTYGPAAPALSRLSRSIREYSLFQAVLLVTEQLREHYPYLEDDELYDLLEFEANPSLG
FPRSDVDRVEFFREHGQLRARLRFNLVSLIGSSSPLPAFYGEQALGDSEDGNPTRQFLDL
FHHRLQRLLLPIWQKYRYRASFKSGALDGFSSHLFALIGLGGEEIRRAKELNWKRLLPYL
GVLSLRAHSAALIEAVLRYYFKHADLVIEQCLERRVEILEEQCNRLGLANSLLGEDAVLG
ERVRDRSGKFRIHITQLDWQRFHEFLPIGLGYQPLCALVRFTLRDPLDYDIRLELRREEI
RELRIGEQNVCHLGWTSWLGRERADGVVTLGSKIH
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggacaccacgtatgggcctgcagcccctgctttgagccggctgagccggagcatccgt
gaatactcgctgttccaggcggttctgctggtcaccgagcagttgcgcgagcattacccg
tacctggaggacgacgagctgtatgacctgctcgagttcgaggccaacccgagcctgggc
tttccgcgcagcgatgtcgaccgcgtcgagttcttccgcgagcacggccagttgcgtgcg
cgtcttcgattcaacctggtgagcctgatcggttccagctcgccgctgcccgcgttctat
ggcgaacaggcgttgggtgacagtgaagatggcaaccccacgcgccagtttctcgacctg
ttccaccaccggctgcaacgcttgctcctgccgatctggcaaaagtaccgctaccgcgcc
agcttcaagagcggggcgctggatggcttctcatcgcacctgttcgccttgatcggcctg
ggcggtgaggagatccgcagggcaaaggaactgaactggaagcgcctactgccgtacctg
ggcgtgctgagcctgcgtgcgcattcggccgccctgatcgaggcggtgctgcgctattac
ttcaagcacgccgacctggtcatcgagcaatgcctggaacgacgcgtggagattctcgag
gaacagtgcaaccgccttggcctggcgaacagcctgctcggtgaagacgcggtactgggc
gagcgggtgcgcgatcgcagtggcaagttccgtattcacatcacccagttggactggcag
cgctttcacgaattcctgcccatcggcctcggctatcagccgctgtgtgcgttggtgcgt
ttcacgctgcgcgacccccttgattacgacatccgcctggagctgcgccgcgaggaaatt
cgcgagctacgcattggcgagcagaacgtctgccacttgggctggaccagctggttgggg
cgcgagcgcgccgatggcgtggtgactttgggaagcaaaattcattaa
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