Pseudomonas sp. VLB120: PVLB_09920
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Entry
PVLB_09920 CDS
T02897
Name
(GenBank) hypothetical protein
KO
K11893
type VI secretion system protein ImpJ
Organism
psv
Pseudomonas sp. VLB120
Pathway
psv02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
psv00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PVLB_09920
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
psv02044
]
PVLB_09920
Secretion system [BR:
psv02044
]
Type VI secretion system
Imp/Vas secretion system core components
PVLB_09920
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
T6SS_VasE
Motif
Other DBs
NCBI-ProteinID:
AGZ34780
UniProt:
A0AAN0R1L6
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All DBs
Position
2176427..2177758
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AA seq
443 aa
AA seq
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MNVHKVVWQEGMLLRPQHFQHNDRYYDSQMKTRTQLLGNCTWGFIDLEIDLQFLTMGKLV
ISRAAGILPDGSLFELDGSSEPLALDVPPNTGSTPIFMALPLVTGNHIEARRPEQAEVLT
RYTTYELEVSDSNAGDDNSTQINCARPDFRLLLGEQQGDQAYVKLKVCEVLDTSPDGVIT
LDPDFVPSYIRTQSSVYLQSCLKEVISMLALRGDTLAERIRSNGKVGGAEVGDFMMLQLI
NRTELLLRHYLNLEQVHPEELYRTFLIMLGDLSTFSSDTKRPRLDARYQHSDQGSSFRKL
MESIRQVLSMVLEQHAIELELQQRQYGILVSPLHDPGLLTTASFVLAASANCESEELRQR
LPLHLKVGPVERIRQLVNLHLPGLKVKPLPVAPRQIPFHANKTYFIVELDAADRAKMDGS
GGFAFHVTSEFSDLELKFWAIRN
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtgcacaaggtagtctggcaggaaggcatgctgctgcgcccgcagcatttccag
cacaacgaccgctactacgacagccagatgaaaacccgcacgcagctgctgggtaattgc
acctggggtttcatcgatctggagatcgacctgcagttcctgaccatgggcaagctggtg
atcagtcgtgccgcaggcatcctgccggatggcagtctgttcgagctcgatggcagcagt
gaaccgctggccctggacgtgccgccaaacaccggcagcacgccgatcttcatggccttg
ccgctggtcaccggaaaccacatcgaggcccgccggccggagcaggccgaggtattgacg
cgctataccacctacgagctggaggtcagcgattccaacgcgggcgatgacaacagcacc
cagatcaactgcgcgcgcccggacttccgcctgctgctgggcgagcagcagggcgaccag
gcgtacgtcaagctcaaggtgtgcgaagtgctcgacacctcgccggacggggtcattacc
ctggatccggacttcgtcccgagctacatccggacccaatcctcggtgtacctgcagtca
tgcctgaaggaagtgatcagcatgctggccttgcgtggcgacaccctggccgagcgcatc
cgctccaatggcaaggtcggcggtgcagaggtgggcgacttcatgatgctgcagctgatc
aaccgtaccgagttgctgctgcgtcactacctgaaccttgagcaggtgcacccggaagag
ttgtaccgcaccttcctgatcatgctcggcgacctgtcgaccttctccagcgacaccaag
cgccctcggctggacgctcgttaccagcacagtgaccagggcagcagcttccgcaagctg
atggagtcgatccgtcaggtgttgtcgatggtgctcgagcaacatgccatcgagttggag
ctgcaacagcgccagtacggcatcctggtttcacccttgcacgatccagggctgctcacc
acggcatcgttcgtactggccgccagcgccaactgcgaatccgaggagctgcgccagcgt
ctgccgctgcacctcaaggtcggcccggtggagcgcattcgccagttggtcaaccttcac
ttgcctgggctcaaggtcaagcccttgcctgtggcgccgaggcagatcccgtttcatgcc
aacaaaacctacttcatcgtcgaactcgatgccgcagatcgcgccaagatggatggctct
ggtggtttcgccttccacgtcaccagtgagttctccgatcttgaactgaaattctgggcc
atcaggaactga
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