Pseudomonas sp. VLB120: PVLB_10035
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Entry
PVLB_10035 CDS
T02897
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
psv
Pseudomonas sp. VLB120
Brite
KEGG Orthology (KO) [BR:
psv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psv03016
]
PVLB_10035
Enzymes [BR:
psv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
PVLB_10035
Transfer RNA biogenesis [BR:
psv03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
PVLB_10035
Prokaryotic type
PVLB_10035
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B
Lactamase_B_4
NAD_binding_10
Aspzincin_M35
DUF6500
Motif
Other DBs
NCBI-ProteinID:
AGZ34803
LinkDB
All DBs
Position
complement(2210626..2211582)
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AA seq
318 aa
AA seq
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MDLLFLGTSSGVPTKTRNVSATAVIEASGRHWYLVDCGEGTQHQLLHTPLSIRDLRGIFI
THVHGDHCFGLPGLLASAGMSGRTEPLDLVLPHALHDWIRLSLAASETYLPFELRLLAVE
SLADWCSETLQVNTVQLSHRVPSVGFVFTELNPEPRLDVQRLDAEGIPRGPLWGELAQGL
SVEFDGRVLHGHDYLRASRPARKLIVCGDNDNPELLAEVARNADVLVHEATFTQAIIARN
GVTYGHSTAAAVARFAAQAGVRNLVLTHFSARYQSNPQRSPCIDDVHEEAQAYYGGNLTL
ARDLQRYHIGRDGCLHAV
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
ttggacctgctgtttctgggcacctcttccggggtgcccaccaagacccgtaatgtcagc
gccaccgccgtgatcgaagccagtggtcgccactggtacctggtcgattgcggcgaaggc
acccagcaccaattgctgcatacaccgctgtcgatacgcgacctgcgcggcattttcatc
acccatgtgcatggtgaccattgctttggccttccaggcctgctggccagcgccggcatg
agcggtcgcaccgaacccttggacctggtgctgcctcacgcgctgcatgactggatccgc
ctgagcctggcggccagtgaaacctacctgccgttcgagctgcgtctgctggcggtcgag
agcctggccgactggtgcagcgaaacccttcaggtgaacaccgtgcaactgtcgcaccgt
gtgcctagcgtcggtttcgtgttcaccgagctgaacccagagccacgcctggatgtacag
cgcctggacgccgagggtatcccccgtggccccttgtggggcgagctggcccagggcctt
tcggtggaattcgacggacgagtgctgcatggccacgactacctgcgggcgtctcgtcct
gcgcggaagctcatcgtctgcggcgacaacgataaccctgagcttttggccgaggtggcc
agaaacgcggatgtgctggtgcacgaagccaccttcacccaagcgatcatcgcgcgcaac
ggggtaacgtacggccacagcaccgcagctgcggtcgcacgctttgccgcgcaggctggc
gtgcgcaacctggtgctgacccatttcagcgcccgctaccagtccaacccccagcgcagc
ccgtgtatcgacgatgtgcacgaggaagcccaggcgtactacggtggcaacctgaccctc
gcgcgggatctgcagcgctaccacatcgggcgtgatggctgcctgcacgccgtttga
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