Pseudomonas sp. VLB120: PVLB_10555
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Entry
PVLB_10555 CDS
T02897
Name
(GenBank) ABC transporter permease
KO
K02053
putative spermidine/putrescine transport system permease protein
Organism
psv
Pseudomonas sp. VLB120
Pathway
psv02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
psv00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PVLB_10555
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psv02000
]
PVLB_10555
Transporters [BR:
psv02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
PVLB_10555
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
AGZ34905
LinkDB
All DBs
Position
complement(2319345..2320166)
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AA seq
273 aa
AA seq
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MHSDSSTHGQASWGLKAAAWGGLVFLHFPILIIFLYAFNTEDAAFSFPPKGFTLHWFSVA
FARQDVLDAIVLSVKVAGIATLIAMVLGTLASVALYRRDFFGKEGISLMLILPIALPGII
TGIALLSAFKSLGIEPGMLTIVIGHATFCVVIVYNNVIARLRRTSQSLIEASMDLGADGW
QTFRHVILPNLGSALLAGGMLAFALSFDEIIVTTFTAGHERTLPIWLLNQLGRPRDVPVT
NVVAMLVMLVTMLPILGAYYLTKGGEGVAGSGK
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgcactctgactcctcaacccacggccaggcttcctgggggctgaaagccgccgcctgg
ggcggactggtgttcctgcacttcccgatcctgatcatcttcctgtacgccttcaacacc
gaggacgccgccttcagcttcccgcccaagggcttcaccctgcactggttcagcgtggcg
ttcgcgcgccaggacgtactcgatgccatcgtgctgtcggtaaaggtcgccggcatcgcc
acgctgatcgccatggtgctgggcaccctggcctcggtggcgctgtaccggcgcgacttc
ttcggcaaggaaggcatctcgctgatgctgatcctgccgattgccttgcccggcatcatc
acgggtatcgccctgctgtcggcgttcaagtcactgggcatcgagccgggcatgctgact
atcgtcatcggccatgccactttctgcgtggtgatcgtctacaacaacgtcatcgctcgc
ctgcggcggacctcccagagcctgatcgaagcctcgatggacctgggcgccgatggctgg
cagaccttccgccacgtgatcctgcccaaccttggctcggccttgctggccggcggcatg
ctggcgttcgccctgtcgttcgacgaaatcatcgtcaccaccttcaccgccggccatgag
cgaaccttgccaatctggctgctgaaccaactgggccgcccccgcgacgtccccgtaacc
aacgtggtcgccatgctggtgatgctggtgacgatgctgccgatcctgggcgcctattac
ctgaccaaaggtggcgaaggcgtggcgggcagcggcaagtag
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