Pseudomonas sp. VLB120: PVLB_11090
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Entry
PVLB_11090 CDS
T02897
Name
(GenBank) GntR family transcriptional regulator
KO
K23466
GntR family transcriptional regulator, trigonelline degradation regulator
Organism
psv
Pseudomonas sp. VLB120
Brite
KEGG Orthology (KO) [BR:
psv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psv03000
]
PVLB_11090
Transcription factors [BR:
psv03000
]
Prokaryotic type
Helix-turn-helix
GntR family
PVLB_11090
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FCD
GntR
MarR_2
HTH_24
HTH_IclR
TrmB
HTH_Crp_2
Fe_dep_repress
HTH_27
HTH_CodY
HTH_5
HTH_11
GMT-wHTH
HTH_36
DUF6880
HTH_41
MarR
NBD_C
HTH_28
HTH_29
Ribosomal_S25
EAP30
HTH_20
HTH_23
HcgB
TFIIE_alpha
CT_C_D
Motif
Other DBs
NCBI-ProteinID:
AGZ35008
UniProt:
A0AAN0R255
LinkDB
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Position
complement(2436876..2437628)
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AA seq
250 aa
AA seq
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MKRQPLDDSFKVNRNPVTLREIVLDKLRGAIMNFHLLPGDRLVERDLCDRLGVSRTSVRE
ALRHLESEGLVEFADAKGPRVAIITLEDARDIYELRCVLEGLIVQLFTLNAKAKDIRALE
RALEVNREALEEGELQQVLESVQGFYDVLLEGSGNQVAAQQLRQLQARISYLRATSVSQE
NRRGASNREMEKIVEAIKSGDPVVAHQASVDHVRAAAKVALEYLRQKQDDNTKVRDIVEP
LALKEPRIGR
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgccagccactcgacgacagcttcaaggtcaaccgcaaccccgttactctgcgt
gaaatcgtgctcgacaagctgcgcggcgcgatcatgaatttccaccttctaccaggcgac
cgcctggtagagcgcgacctctgcgaccgccttggcgtgagccgcacctcggtgcgcgaa
gccctgcgtcacctggaatccgaaggcctggtggaattcgccgacgccaagggcccacgc
gttgccatcatcaccctggaagatgcccgcgacatctacgagctgcgctgtgtactcgaa
ggcctgatcgtgcagctgttcacgctcaacgccaaggccaaggacatccgcgcccttgag
cgcgccctcgaggtcaaccgcgaagccctcgaagaaggcgaactgcagcaagtgctcgag
tcggtacaaggcttctacgacgtcctgctcgaaggctccggcaaccaggtggcggcgcaa
cagctacgccagcttcaggcccgcatcagctacctgcgcgccacttcggtgtcgcaagag
aaccgccgcggcgccagcaaccgtgagatggagaagattgtcgaggcgatcaagagtggc
gacccagtggttgcccaccaagcttcggtcgaccacgttcgcgccgccgccaaggtagcg
ctggaatacctgcgccagaagcaggacgacaacaccaaggtgcgcgatatcgtcgagccc
ctggccctcaaggaacctcgcataggccgctga
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