Pseudomonas sp. VLB120: PVLB_11330
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Entry
PVLB_11330 CDS
T02897
Name
(GenBank) hypothetical protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
psv
Pseudomonas sp. VLB120
Brite
KEGG Orthology (KO) [BR:
psv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psv03009
]
PVLB_11330
Ribosome biogenesis [BR:
psv03009
]
Prokaryotic type
ribosomal protein modification factors
PVLB_11330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YcaO_C
YcaO
OsmC
Sin3a_C
Motif
Other DBs
NCBI-ProteinID:
AGZ35056
UniProt:
A0AAN0R242
LinkDB
All DBs
Position
2486271..2488460
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AA seq
729 aa
AA seq
DB search
MEIKVNFLDNLRLEAKFDDFTVIADQPIRYKGDGSAPGPFDYFLASSALCAAYFVKLYCQ
TRNIPTEHIRLSQNNIVDPENRYNQIFKIQVELPEDISEKDRQGILRSIDRCTVKKVVQT
GPQFIIEEVDNLDADAQGLLMPVADTTTYIAGKDLPLEQTIANMSSILAGLGMKIEIASW
RNIVPNVWSLHVRDAQSPMCFTNGKGATKEAALASALGEFIERLNCNFFYNDQFWGEEIA
NAPFVHYPNERWFKPGPKDALPVEILDAYCLDIYNADGELRGSHLYDTNSGNTERGICSL
PFVRQSDGEVVYFPSNLIENLFLSNGMSAGNTLAEAQVQCLSEIFERAVKREILEGELAL
PDVPQEVLAKYPGILAGIQGLEEQGFPVLVKDASLGGEFPVMCVTLMNPRTGGVFASFGA
HPSFEVALERSLTELLQGRSFEGLNDLPQPTFESHALTEPNNFVEHFIDSSGVVSWRFFS
AKADFEFVEWDFSGHGEDSNVQEAQTLFGILEDMGKEVYMAVYDDLGANACRILVPGYSE
IYPVEDLIWDNTNRALAFRADILNLHSLDNRALRALLKRLDNCEVDDYTTITTLIGVEFD
ENTVWGQLTILELKLLICLALQRFEDAKELVEAFLQFNDNTVERGLFYQALNVVLEVVLD
DELEMADYEVNFRRMFGNPRMDAVLGSVDGSVRFHGLTPTSMKLEGLDRHLRLIESYKKL
HAARAKAAQ
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcaaggtcaattttctcgacaacctacgtcttgaagccaagttcgacgacttc
acggtaatcgccgaccagccgatccgctataaaggcgatggctcggcgccggggccgttc
gactacttcctggcgtcgtcggccttgtgcgcggcttacttcgtgaagttgtactgccag
acacgcaatatccccaccgagcacatccgtctttcgcagaacaacatcgtcgacccggaa
aaccgctacaaccagatcttcaagatccaggtcgagctgcccgaggacatttccgagaag
gaccgtcagggcatcctgcgctccatcgaccgctgcacggtcaagaaggtggtgcagacc
ggtccgcagttcatcatcgaggaagtcgacaacctcgacgccgatgcccagggcctgctg
atgccggtggccgacaccaccacttacatcgccggcaaggacctgcctctggagcagacc
atcgccaacatgtcgtcgatcctggcggggttgggcatgaagatcgagatcgcgtcgtgg
cgcaacatcgtgcccaacgtgtggtcgctgcatgtgcgtgacgcacagtcgccgatgtgc
ttcaccaacggcaagggtgcgaccaaggaggctgcgctggcttcggcgctgggcgagttc
atcgagcggctgaactgcaacttcttctacaacgaccagttctggggcgaggaaatcgcc
aatgcgccgttcgtgcactaccccaatgagcgctggttcaagccagggccaaaggatgcg
ctgccggtggagatcctcgacgcgtattgcctggacatctacaacgccgatggcgagttg
cgcggctcgcacctttacgacaccaactcgggcaataccgagcgcggtatttgctcgctg
ccattcgtgcgccagtcggacggtgaagtggtctatttcccgtccaacctgatcgagaac
ctgttccttagcaatggcatgagcgcgggcaataccctggccgaagcccaggtgcagtgc
ctgtccgagatcttcgagcgggcggtcaagcgcgaaatcctcgaaggcgaactggcgctg
ccggatgtgccgcaggaagtgctggccaagtacccaggcatcctggccggaatccagggg
ctggaagagcaaggcttcccggtgctggtcaaggatgcgtcgctaggcggtgagttcccg
gtgatgtgcgtgaccctgatgaacccgcgcaccggtggcgtattcgcctcgttcggcgcc
cacccgagcttcgaagtggcactggaacgcagcctcaccgaattgctgcagggccgcagt
ttcgaagggctgaacgacttgccgcagccaaccttcgaaagccatgccctgaccgagccg
aacaacttcgtcgaacacttcatcgactccagcggcgtggtgtcgtggcgcttcttcagt
gccaaggccgatttcgagttcgtcgagtgggacttctccgggcacggcgaggattcgaac
gtccaggaagcccagaccctgttcggtattctcgaagacatgggcaaggaagtgtacatg
gcggtgtacgatgacctcggcgccaatgcctgccgcatcctggtgccgggctactcggag
atctacccggtcgaagacctgatctgggacaacaccaaccgtgccctggcgttccgcgcc
gacatcctcaacctgcacagcctcgacaaccgtgcgctgcgggcgctgctcaagcgcctg
gacaactgcgaggtggatgactacaccaccatcaccaccctgatcggcgtcgagttcgac
gaaaacaccgtgtggggccagttgaccatccttgagctcaagttgctgatctgcctggcc
ttgcagcgtttcgaagacgccaaggagctggtggaggccttcctgcagttcaacgacaac
accgtcgagcgcggcctgttctaccaggccttgaacgtggtgctggaggtcgtgctggac
gatgagctggaaatggcggattacgaagtcaacttccgtcgcatgttcggcaacccgcgc
atggacgcggtgctgggttcggtggacggcagcgtgcgcttccatgggctgaccccgacc
agcatgaagctcgaaggcctcgaccgccacttgcgtttgatcgaaagctacaagaagctg
cacgcggcacgggccaaggccgcccagtaa
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