KEGG   Pseudomonas sp. VLB120: PVLB_15065
Entry
PVLB_15065        CDS       T02897                                 
Name
(GenBank) 2'-5' RNA ligase
  KO
K01975  RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
Organism
psv  Pseudomonas sp. VLB120
Brite
KEGG Orthology (KO) [BR:psv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:psv03016]
    PVLB_15065
Enzymes [BR:psv01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.4  Phosphoric-diester hydrolases
    3.1.4.58  RNA 2',3'-cyclic 3'-phosphodiesterase
     PVLB_15065
Transfer RNA biogenesis [BR:psv03016]
 Prokaryotic type
  tRNA spricing factors
   Other tRNA splicing factors
    PVLB_15065
SSDB
Motif
Pfam: LigT_PEase 2_5_RNA_ligase2 Acb1
Other DBs
NCBI-ProteinID: AGZ35797
UniProt: A0AAN0VAQ4
LinkDB
Position
complement(3306962..3307504)
AA seq 180 aa
MPQDVRPSGAPFKRLFFALPVKGSQRSDIAQWRRGLNLRSGKPVPSENFHLTLLFLGDVD
AAQVPAICAVVDNLARPEAPLRLLLDRLQVWNRANALVLEPQETPAGMRQLVYGLQQALL
PLGFQEQAREYRPHLTLSRDFRGQLPEATVAPEFFIAARHFTLYESRKGRYWPLAEWPLL
NT seq 543 nt   +upstreamnt  +downstreamnt
atgccccaggatgttcgcccaagtggcgccccgttcaagcgactgttcttcgcactaccg
gtaaaaggcagccagcgcagtgacattgcccaatggcggcgcggtctgaacctgcgcagt
ggcaagccggtgcccagcgagaacttccacctgaccttgttgtttcttggcgatgtggac
gccgcacaggtgcctgccatttgcgccgtggtagacaatctggcgcggcccgaggcgccg
ctgcggttgctgcttgaccggttgcaggtctggaaccgcgccaatgcactggtgttggag
cctcaggaaacgcctgcggggatgcgtcagctggtatatggcctgcagcaggcactgctg
cccctggggttccaggagcaggcacgcgagtaccggccgcaccttaccttgtcccgggat
tttcgcgggcagctgcctgaagcgacggtggccccggagttctttatcgcggcccggcat
ttcaccttgtacgagtcacgcaaggggcgctactggccgctggccgagtggccgttgctg
tag

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