Pseudomonas sp. VLB120: PVLB_16305
Help
Entry
PVLB_16305 CDS
T02897
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
psv
Pseudomonas sp. VLB120
Pathway
psv00020
Citrate cycle (TCA cycle)
psv00190
Oxidative phosphorylation
psv00650
Butanoate metabolism
psv00720
Other carbon fixation pathways
psv01100
Metabolic pathways
psv01110
Biosynthesis of secondary metabolites
psv01120
Microbial metabolism in diverse environments
psv01200
Carbon metabolism
Module
psv_M00009
Citrate cycle (TCA cycle, Krebs cycle)
psv_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
psv_M00149
Succinate dehydrogenase, prokaryotes
psv_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
psv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
PVLB_16305 (sdhA)
00650 Butanoate metabolism
PVLB_16305 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
PVLB_16305 (sdhA)
00720 Other carbon fixation pathways
PVLB_16305 (sdhA)
Enzymes [BR:
psv01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
PVLB_16305 (sdhA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
DAO
Pyr_redox_2
GIDA
FAD_binding_3
Thi4
FAD_oxidored
Pyr_redox_3
Motif
Other DBs
NCBI-ProteinID:
AGZ36044
UniProt:
A0AAN0R425
LinkDB
All DBs
Position
complement(3566266..3568038)
Genome browser
AA seq
590 aa
AA seq
DB search
MASIPTISFDAIIIGGGGAGMRAALQLAQGGHKTAVVTKVFPTRSHTVSAQGGITCAIAS
ADPNDDWRWHMYDTVKGSDYIGDQDAIEYMCQEGPAAVFELDHMGLPFSRTETGRIYQRP
FGGQSKDFGKGGQAARTCAASDRTGHALLHTLYQGNLKAGTTFLNEYYAVDLVKNQDGAF
VGVIAICIETGETLYIKSKATVLATGGAGRIYASTTNALINTGDGVGMALRAGVPVQDIE
MWQFHPTGIAGAGVLVTEGCRGEGGYLINAHGERFMERYAPNAKDLAGRDVVARSMVKEI
IAGNGVGPNKDHVLLKLDHLGEEVLHSRLPGICELSKTFAHVDPVVAPVPVIPTCHYMMG
GIATNIHGQAITMDAEGNDQIIPGLFAVGEVACVSVHGANRLGGNSLLDLVVFGRAAGLH
LEKALTEGVEYRDASDTDVDVALNRLSKLNERTTGEDVASLKRELQSCMQNYFGVFRTGE
YMQKGIEQLAGLRDRIANVKINDKSQAFNTARIEALELQNLLEVAEATAIAAEARKESRG
AHAREDFEDRDDENWLCHTLYYPGEKRVAKRAVNFAPKTVPAFEPKVRTY
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggctagcattcctactatttccttcgacgccatcatcatcggtggcggcggtgccggc
atgcgcgcagcgctgcagctggcgcaaggcggtcacaagactgccgtggtcaccaaggtg
ttcccgacccgttcgcacaccgtttccgcccagggtggcatcacctgcgcgatcgcttcg
gccgacccgaacgacgactggcgctggcacatgtacgataccgtcaagggctccgactac
atcggtgaccaggacgctatcgaatacatgtgtcaggaaggcccggctgcggtcttcgag
ctggaccacatgggtctgccgttctcgcgtaccgaaaccggccgtatctaccagcgtccg
ttcggtggccagtccaaggacttcggcaagggcggccaggctgcccgtacctgcgccgct
tccgaccgtaccggtcacgcgctgctgcacaccctgtaccagggcaacctgaaagccggt
accaccttcctcaacgaatactacgccgttgacctggtgaagaaccaagacggcgcgttc
gtgggtgtgatcgcgatctgcatcgaaaccggcgaaaccctgtacatcaagtccaaggcc
accgtactggccactggcggtgcgggccgtatctatgcctccaccaccaatgccctgatc
aacaccggtgacggcgtgggcatggctctgcgtgctggcgtgccggtgcaggacatcgaa
atgtggcagttccacccgaccggcatcgccggtgccggtgtactggtcaccgagggttgc
cgcggtgagggtggttacctgatcaacgcccacggcgaacgcttcatggagcgttatgcg
ccgaacgccaaagacctggctggccgcgacgtggtcgcccgttccatggtcaaggaaatc
atcgccggcaatggcgtgggcccgaacaaggaccacgtactgctgaagctggaccacctg
ggcgaggaggtgctgcacagccgcctgccaggtatctgcgaactgtccaagaccttcgcc
cacgtcgaccctgtggtcgcgccggtaccggtcatcccgacctgccactacatgatgggc
ggcatcgccaccaacatccacggccaggccatcaccatggatgccgaaggcaacgaccag
atcatcccaggtctgttcgccgtaggtgaagtggcgtgcgtatcggttcacggtgccaac
cgtctgggcggcaactcgctgctcgacctggtggtattcggccgcgctgccggtctgcac
ctggagaaggcgctgaccgaaggcgtcgagtaccgcgatgccagcgacaccgacgtcgat
gttgcactgaaccgcctgagcaagctgaacgagcgcaccaccggtgaagacgtcgccagc
ctcaagcgcgagctgcagagctgcatgcagaactacttcggtgtgttccgtactggcgaa
tacatgcagaagggtatcgagcagctggccggtctgcgtgaccgcatcgccaacgtcaag
atcaatgacaagtcccaggccttcaacaccgcgcgtatcgaagcgctggagctgcagaac
ctgctggaagttgctgaagctaccgccatcgcggccgaagcccgtaaagagtcccgcggc
gctcacgcccgtgaagacttcgaagaccgtgacgacgagaactggctgtgccacaccctg
tactacccgggtgagaagcgcgttgccaagcgtgcagtcaacttcgcgccgaagaccgta
ccggccttcgaaccaaaagtccggacttactaa
DBGET
integrated database retrieval system
