Pseudomonas sp. VLB120: PVLB_16625
Help
Entry
PVLB_16625 CDS
T02897
Name
(GenBank) DNA polymerase III subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
psv
Pseudomonas sp. VLB120
Pathway
psv03030
DNA replication
psv03430
Mismatch repair
psv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PVLB_16625
03430 Mismatch repair
PVLB_16625
03440 Homologous recombination
PVLB_16625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psv03032
]
PVLB_16625
03400 DNA repair and recombination proteins [BR:
psv03400
]
PVLB_16625
Enzymes [BR:
psv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PVLB_16625
DNA replication proteins [BR:
psv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PVLB_16625
DNA repair and recombination proteins [BR:
psv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PVLB_16625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
DNA_pol3_tau_5
AAA
RuvB_N
AAA_5
AAA_22
AAA_14
ResIII
AAA_30
TIP49
AAA_16
PIF1
AAA_18
AAA_19
AAA_2
TsaE
nSTAND3
AAA_7
HasA
Rad17
SKI
Herpes_Helicase
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
AGZ36108
UniProt:
A0AAN0R441
LinkDB
All DBs
Position
complement(3672836..3674848)
Genome browser
AA seq
670 aa
AA seq
DB search
MSYQVLARKWRPRSFREMVGQTHVLKALINALDNQRLHHAYLFTGTRGVGKTTIARIIAK
CLNCETGITSTPCGTCSVCREIDEGRFVDLIEIDAASRTKVEDTRELLDNVQYAPSRGRF
KVYLIDEVHMLSTHSFNALLKTLEEPPPYVKFILATTDPQKLPATILSRCLQFSLKNMSP
ERVVEHLSHVLTAENVPFEPDALWLLGRAADGSMRDAMSLTDQAIAFGEGKVLAADVRAM
LGSLDHGQVYGVLQALLEGDARALLEAVRNLAEQGPDWSGVLAEMLNVLHRVAIAQALPE
AVDNGQGDRERVLALAAALPAEDVQFYYQMGLIGRRDLPLAPDPRGGFEMVLLRMLAFRP
ADTDDAPKPVLKPVGISQATADSAKPVAAAAVAVASPVVEAPPAPAVEQVVAEPAPEAEP
EVAHSAPAPVEEVVDLPWEEPAAQPAPKAIEPVPAPVPVKPEPPSAPPAFEAPPFDPNAY
APAGMDRDDEPPMDDDYYAGDSEPMGFSYLDELAEHVQEDQPVAAPEPLPAAQPATGLAL
QWLELFPQLPVSGMTGNIAANCTLIAADGDDWLLHLDPGQGALFNSTQQRRLNEALNQHL
GRTLNLRIELVRPEQETPAQAASRKRAERQHEAVVSIEQDPLIQQMIKLFGATVRHDTIE
PVDALVSQGQ
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaggttcttgcacgtaaatggcgtccgcgctcgttccgcgaaatggtcggc
cagacccatgtgctcaaggccttgatcaacgcgctggacaatcagcgcctgcatcacgcc
tacctgttcaccggcacccgcggggtcggcaagactaccattgcgcgcatcatagccaaa
tgcctgaactgcgaaaccggcatcacgtccacgccttgtggcacctgttcggtgtgccgt
gagatcgacgagggccgtttcgtcgacctgatcgagatcgacgccgccagccgaaccaag
gtggaagacacccgcgaactgctcgataacgtgcagtacgcgccaagccgcggacgcttc
aaggtctacctgatcgacgaagtgcacatgctgtccactcactcgttcaacgccttgctc
aagacgctggaagagccgccgccctacgtcaagttcatcctggccaccaccgacccgcag
aagctgccggccaccatcttgtcgcggtgcttgcagttctcgctgaagaacatgagcccc
gagcgggtggtcgagcacctgagtcacgtgctcacggccgagaacgtgccgttcgagccg
gatgcgctgtggttgctcggacgtgccgccgatggctcgatgcgcgacgccatgagcctt
accgaccaagccatcgccttcggtgagggtaaggtgctggccgctgacgtgcgtgccatg
ctcggcagccttgaccatggccaggtctatggcgtgctccaggcgttgctggaaggcgat
gcccgtgccctgctcgaagcggtgcgcaacctggccgagcaagggccggactggagtggc
gtactggctgaaatgctcaatgtgttgcaccgggtggccatcgcccaggctttgccagag
gcggtggacaatggccagggcgatcgtgagcgagtgctggccctggcggcggcgttgccc
gccgaggacgtgcagttctattaccagatgggcctgatcggccgtcgtgacctgccgttg
gcgccggaccctcggggcggcttcgagatggtgctgttgcgcatgctggcgttccgtccg
gccgataccgacgatgcgccgaaaccggtactaaagccggtggggatcagccaggccaca
gctgattctgcgaaaccggtggcagcggcggcggttgctgttgcgtcgcccgttgtcgag
gcgccgccagcgcctgcggtcgagcaggtggtcgcggagccggcgccggaagctgagcca
gaagtggctcattcggcgcctgcacctgtagaagaggttgtcgacctgccgtgggaggag
cccgcggcccagccagctccgaaggccatcgagcctgttccggcgcctgtgcctgtgaag
cccgagccaccaagcgcaccgccagccttcgaggcgccaccgttcgatccgaatgcctat
gctccagcaggcatggaccgtgatgatgagccgccgatggacgacgactactatgctggc
gacagcgagccgatgggcttcagctacctcgacgaattggccgaacacgttcaggaagac
cagcctgtcgcagccccagagccgttgcctgctgcccagccagccaccggtctggccttg
caatggctggaattattcccacagttgcctgtctccggtatgacaggcaacatcgcggca
aactgtacgctgatcgcggcagacggtgatgactggctgttgcacctggatcccgggcag
ggcgcgctgttcaacagcactcagcagcgccgcttgaacgaagcgctcaaccagcacctg
gggcgtaccctgaaccttaggatcgagttggtgcgccccgagcaggagacgcccgcccaa
gccgcatcgcgcaagcgcgccgagcgccagcatgaggcggtggtgtcgatcgagcaggac
cccttgatccagcagatgatcaaactgttcggtgccacggtccggcacgatactattgag
cctgtagacgccctggtcagccagggccagtaa
DBGET
integrated database retrieval system
