Pseudomonas sp. VLB120: PVLB_17105
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Entry
PVLB_17105 CDS
T02897
Symbol
fliA
Name
(GenBank) flagellar biosynthesis sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
psv
Pseudomonas sp. VLB120
Pathway
psv02020
Two-component system
psv02025
Biofilm formation - Pseudomonas aeruginosa
psv02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
psv00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PVLB_17105 (fliA)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PVLB_17105 (fliA)
09142 Cell motility
02040 Flagellar assembly
PVLB_17105 (fliA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psv03021
]
PVLB_17105 (fliA)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
psv02035
]
PVLB_17105 (fliA)
Transcription machinery [BR:
psv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PVLB_17105 (fliA)
Bacterial motility proteins [BR:
psv02035
]
Flagellar system
Flagellar assembly proteins
Stator
PVLB_17105 (fliA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
UPF0122
HTH_30
GerE
MarR_2
Phage_terminase
Rv2175c_wHTH
Motif
Other DBs
NCBI-ProteinID:
AGZ36202
LinkDB
All DBs
Position
complement(3781581..3782321)
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AA seq
246 aa
AA seq
DB search
MNASGFKMYSRASKDAQYELVERYAPLVKRIAYHLLARLPANVQVEDLIQAGMIGLLEVA
NKYDASKGASFETYAGIRIRGAMLDEVRKGDWAPRSVHRNTRMVSDAMRSVEARTGRDAK
DHEVAAELQLSLDDYYGILNDTLGSRLFSFDDLLQDGEHEGLHEDGASGQIEPSRDLEDE
RFQAALTDAIANLPERERLVLALYYDEELNLKEIGEVLGVSESRVSQLHSQCAARLRSRL
GEWRAR
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgagcggtttcaagatgtacagcagggcgtccaaggatgcccagtacgaactg
gtggagcggtatgcgccactggtcaaacgcatcgcctaccacctgctggcccgtctgcca
gccaatgtccaggtggaggacctgatccaggccggcatgatcggcctcctggaagtggcc
aacaaatacgacgccagcaagggcgcaagcttcgaaacctatgcgggtattcgaatccgt
ggcgcgatgctcgacgaggtgcgcaagggcgattgggcgccgcgttccgtgcaccgaaac
acgcgcatggtcagtgacgcgatgcggtctgttgaagccagaacaggtcgcgacgctaaa
gatcacgaagttgctgccgaacttcaattgagtctcgatgattactacgggattttgaac
gataccctgggcagtcgcctgttcagcttcgacgacctgttgcaggacggcgagcacgaa
gggttgcacgaggatggcgccagcggccagatcgagccgtcgcgcgatctggaggacgaa
cgcttccaggctgccctgaccgatgcgatcgccaacttgccggagcgtgagcggctggtg
ctggcgctgtactacgacgaagagctgaacctcaaggaaatcggtgaggtgcttggggtc
agcgaatcgcgtgtcagccagctgcacagccaatgcgcggcgcgcctgcgcagtcgtctt
ggggaatggcgggcacgttga
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integrated database retrieval system
