Pseudomonas sp. VLB120: PVLB_17215
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Entry
PVLB_17215 CDS
T02897
Name
(GenBank) Fis family two component sigma-54 specific transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
psv
Pseudomonas sp. VLB120
Pathway
psv02020
Two-component system
psv02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
psv00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PVLB_17215
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
PVLB_17215
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
psv02022
]
PVLB_17215
02035 Bacterial motility proteins [BR:
psv02035
]
PVLB_17215
Two-component system [BR:
psv02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
PVLB_17215
Bacterial motility proteins [BR:
psv02035
]
Flagellar system
Flagellar assembly proteins
Others
PVLB_17215
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
FleQ
AAA_2
HTH_20
HTH_30
MerR
AAA_3
AAA
AAA_19
nSTAND3
MCM
HTH_24
Mg_chelatase
HTH_11
HTH_23
HTH_28
DUF2249
Sigma70_r4_2
HTH_17
HTH_1
TIP49
ATPase
AAA_14
AAA_22
HTH_Mga
Myosin_head
Gifsy-2
Xre-like-HTH
Motif
Other DBs
NCBI-ProteinID:
AGZ36224
LinkDB
All DBs
Position
complement(3802566..3803942)
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AA seq
458 aa
AA seq
DB search
MQIKVLLVEDDRVLRQALGDTLEIGGYGYRAVGSAEEALEAASGEAFSLVVSDVNMPGMD
GHQLLAQLRRHHPHLPVLLMTAHAAVERAVDAMRQGAVDYLVKPFEPKALLSLVERHAAG
RVGPADEDGPVACEPASRQLLELAARVARSDSTVLISGESGTGKEVLARYIHQQSLRAAQ
PFVAINCAAIPDNMLEATLFGHEKGAFTGAIAAQEGKFEQANGGTLLLDEISEMPLGLQA
KLLRVLQEREVERVGGRKPVTLDIRVLATTNRDLAGEVSAGRFREDLYYRLSVFPLAWQP
LRERSGDILPLAERLLARHVAKMKHAPVRLSADARACLQGYAWPGNVRELDNALQRALIL
QQGGVIEAADFCLAGAIPLATSGGAITAPLSEDLTVEGSGLGDDMRRHEFQMIIDTLRAE
RGRRKEAAERLGISPRTLRYKLAQMRDAGLDVEASLYG
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcaaggtgctgctggtcgaggatgaccgcgtgttgcgccaggcgctgggcgac
accctggaaatcggcggctatggctaccgcgcggtcggtagtgccgaagaggcgctcgaa
gcggcaagcggcgaggcgttcagcctggtggtcagtgatgtgaacatgccgggcatggac
ggtcaccaactcttggcgcagttgcgccgtcatcacccccatttgccggtgctgctgatg
accgctcatgctgcggtggagcgcgccgtcgatgcgatgcgccagggcgctgtcgattac
ctggtcaagccgttcgagcccaaggcgttgctaagcctggtggagcgccatgccgcaggg
cgggtggggccggctgacgaagacgggccagtggcttgcgagccggccagccggcaattg
ctggagttggcggcgcgggttgcgcgcagcgactccacggtgttgatctcgggtgagtcg
ggcaccggcaaggaagtgctggcgcgttacattcaccagcagtcgttgcgtgcggcgcag
ccattcgtggcaatcaattgtgcagccattccggacaacatgctcgaagcgaccttgttc
ggtcacgagaaaggcgctttcaccggtgcgatcgccgcccaggagggcaagttcgagcag
gccaacggcggcaccttgctgctcgatgagatttccgagatgccgctggggttgcaagcc
aagttgctgcgcgtgctgcaagagcgcgaggtggagcgggtaggtgggcgcaagccggtc
acgctggatattcgggtactggccactaccaaccgtgatctggcgggtgaagtgtcggcg
gggcgattccgcgaggacctttactaccgtctttcggtattccccttggcgtggcagccg
ctgcgcgaacgcagtggcgatatcctgccgctggccgagcgtctgctggcgcgccatgtg
gcgaagatgaagcatgcgccggtgcggctgtccgccgatgcgcgggcttgcctgcagggt
tatgcctggcccggcaacgtccgagagttggacaatgcgctgcagcgggctttgatcctg
cagcaaggcggggtcatcgaggcggcggatttctgcctggctggcgccatacccttggcg
acttcgggcggtgccattactgcgccattatctgaagatttgacggtcgagggctctggg
ttgggtgatgacatgcgtcgtcacgaattccagatgatcatcgacaccctgcgcgccgaa
cgtgggcgccgcaaggaagctgccgagcggctggggatcagcccacgcaccttgcgctac
aagctggcgcagatgcgggatgccgggctcgatgtagaagccagtctgtacggttga
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