Pseudomonas sp. VLB120: PVLB_18120
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Entry
PVLB_18120 CDS
T02897
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
psv
Pseudomonas sp. VLB120
Pathway
psv00061
Fatty acid biosynthesis
psv00071
Fatty acid degradation
psv01100
Metabolic pathways
psv01212
Fatty acid metabolism
psv02024
Quorum sensing
psv04146
Peroxisome
Module
psv_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
psv00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
PVLB_18120
00071 Fatty acid degradation
PVLB_18120
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
PVLB_18120
09145 Cellular community - prokaryotes
02024 Quorum sensing
PVLB_18120
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
psv01004
]
PVLB_18120
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psv04147
]
PVLB_18120
Enzymes [BR:
psv01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
PVLB_18120
Lipid biosynthesis proteins [BR:
psv01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
PVLB_18120
Exosome [BR:
psv04147
]
Exosomal proteins
Exosomal proteins of breast milk
PVLB_18120
Exosomal proteins of breast cancer cells
PVLB_18120
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Legum_prodom
Motif
Other DBs
NCBI-ProteinID:
AGZ36405
UniProt:
A0AAN0R4Q0
LinkDB
All DBs
Position
complement(4010133..4011821)
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AA seq
562 aa
AA seq
DB search
MQAEFWNDKRPAGVPSTIDLNAYKSVVEVFERSCKRFADRPAFSNLGVTLTYAELERHSA
AFAAWLEHHTDLKPGDRIAVQMPNVLQYPIAVFGALRAGLIVVNTNPLYTEREMRHQFKD
SGARALVYLNMFGKRVQEVLPDTAIEYLIEARMGDLLPAAKGWLINTVVDKVKKMVPAYR
LPQAVPFRQVLRQGRDLTHKPVEQGLDDIAVLQYTGGTTGLAKGAMLTHGNLVANMLQVL
ACFSQHGPDGQRLIKDGQEVMIAPLPLYHIYAFTANCMCMMVTGNHNVLITNPRDIPGFI
KELGKWRFSALLGLNTLFVALMDHPGFKNLDFSALKVTNSGGTALVKATAERWESLTGCR
IVEGYGLTETSPVASTNPYGQMARLGTVGIPVAGTAFKVIDDDGNELALGERGELCIKGP
QVMKGYWQQPEATAQALDAEGWFKTGDIAVIDPDGFTRIVDRKKDMIIVSGFNVYPNEIE
DVIMGHPQVANCAAIGVPDERSGEAVKLFVVPREKGLSVDELKAYCKANFTGYKVPKHIV
LRDSLPMTPVGKILRRELRDIA
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgcaagccgaattctggaatgacaaacgcccggcgggcgtgccatccaccatcgacctc
aatgcttacaagtctgtcgtcgaagtcttcgagcgctcatgcaagcgctttgccgaccgt
ccggcgttcagcaacctgggagtgaccctgacttacgcagagctggagcggcactcggca
gccttcgccgcctggctcgagcaccacaccgacctgaagccgggcgatcgcatcgccgtg
cagatgcccaacgtcttgcagtaccccatcgccgtgttcggcgcgctgcgggccggcctg
atcgtggtgaacaccaacccgctctacaccgagcgcgagatgcgccatcagttcaaggac
tccggcgcccgtgcgctggtgtacctgaacatgttcggcaagcgtgtgcaggaagtgttg
cccgataccgccatcgagtacctgatcgaagccaggatgggcgacctgctgcctgcagcc
aagggctggttgatcaacaccgtggtcgacaaggtcaagaagatggtgccggcctatcgg
ttacctcaggccgtgccgttccgccaggtactgcgccaggggcgcgacctgacccacaag
ccggtggagcaggggctggacgatatcgccgtgctgcagtacaccggtggcacgaccggg
ctggccaagggcgcgatgctgacccacggtaacctggtggccaacatgcttcaggtgctg
gcctgcttctcccagcatggcccggatggccagcgcttgatcaaggacgggcaggaagtg
atgatcgcgccgctgccgctgtaccacatctatgcctttaccgcgaactgcatgtgcatg
atggtcaccggcaaccataacgtactcatcaccaatccgcgtgatatccctggcttcatc
aaggagttgggcaagtggcgtttctcggcgctgctggggctgaacacgctgttcgtggca
ttgatggaccacccagggttcaagaacctcgacttctccgcactgaaggtcaccaactct
ggcggtacggccctggtcaaggccaccgccgagcgctgggagagtctcaccggctgccgc
atcgtcgagggctatggcctgaccgagacttcgccggttgccagtaccaatccttatggc
cagatggcgcgccttggcaccgtgggaattccggtggccggcacggcattcaaggtcatc
gacgatgacggcaacgagttggcgctgggcgagcggggcgagctatgcatcaaggggccg
caggtgatgaagggttattggcagcaacctgaagccaccgcccaggccctggatgcggag
ggctggttcaagaccggtgacattgcggtgatcgacccggatggcttcacccgcatcgtt
gaccgcaagaaggacatgatcatcgtctcgggtttcaatgtttaccccaacgagatcgaa
gacgtgatcatggggcacccgcaggtagccaactgtgccgctatcggcgtgccggacgag
cgctcgggggaggcggtgaaactgttcgtagtccctcgggaaaaggggttgagcgtcgac
gaactcaaggcctactgcaaggccaacttcacgggctacaaagtgcccaagcacatcgta
ctgcgagattcactgccgatgacccctgtgggcaagattctgcggcgggagctgcgtgac
atcgcctga
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