Pseudomonas sp. VLB120: PVLB_19240
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Entry
PVLB_19240 CDS
T02897
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
psv
Pseudomonas sp. VLB120
Brite
KEGG Orthology (KO) [BR:
psv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psv03009
]
PVLB_19240 (rimO)
Enzymes [BR:
psv01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
PVLB_19240 (rimO)
Ribosome biogenesis [BR:
psv03009
]
Prokaryotic type
ribosomal protein modification factors
PVLB_19240 (rimO)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
YajR_YAM
CLP1_P
Matrix_Paramyxo_N
Motif
Other DBs
NCBI-ProteinID:
AGZ36629
UniProt:
A0AAN0R554
LinkDB
All DBs
Position
4233577..4234908
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AA seq
443 aa
AA seq
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MSTTPATPKVGFVSLGCPKALVDSERILTQLRMEGYEVVPTYEDADVVVVNTCGFIDSAK
AESLEVIGEAIKENGKVIVTGCMGVEEGNIRDVHPSVLSVTGPQQYEQVVNAVHEVVPPR
QDHNPLIDLVPPQGVKLTPRHYAYLKISEGCNHSCSFCIIPSMRGKLVSRPVGEVLSEAE
RLVKAGVKEILVISQDTSAYGVDVKYKTDFWNGRPVKTRMLELCEALSSLGAWVRLHYVY
PYPNVDDVIPLMAAGKILPYLDIPFQHASPKVLKSMKRPAFEDRTLARIKSWREQCPELV
IRSTFIVGFPGETEEDFQYLLDWLTEAQLDRVGCFQYSPVEGAPANDLGLEEVPDDVKQE
RWDRFMAHQQAISAARLQLRIGKEIDVLIDEVEEQGSVGRSFFDAPEIDGSVFIDGDHGF
KPGDKVRCRVVDADEYDMWAEPL
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccactcccgccacgccgaaggtcggctttgtttccctgggttgccccaaggcc
ctggtcgattccgagcgcatcctgacccagctgcgcatggaaggttatgaagtcgtgccc
acctacgaggacgccgacgtcgtggtggtcaacacctgcggcttcatcgacagcgccaag
gccgagtcgcttgaagtgatcggcgaagcgatcaaggaaaacggcaaggtcatcgtcacc
ggctgcatgggcgtcgaagaaggcaacatccgcgatgtgcacccgagcgtgctgtcggtc
accggtccgcagcagtacgagcaggtggtcaatgccgtgcatgaagtggtaccaccacgc
caggaccacaacccgctgatcgacctggtaccgccgcaaggggtcaagctgaccccacgt
cactatgcctacctgaagatttccgaaggctgcaaccacagctgcagtttctgcatcatt
ccatcgatgcgcggcaagctggtcagccgcccggtgggtgaggtgctgagcgaggccgag
cgcctggtcaaggcgggcgtcaaggaaatcctggtcatctcccaggacaccagcgcctac
ggcgtcgacgtcaagtacaagaccgatttctggaacggtcgcccggtcaagacccgcatg
ctcgagctgtgcgaggccctgagcagcctgggcgcctgggtgcgcctgcactacgtgtac
ccctacccgaacgtcgacgatgtcatcccactgatggccgctggcaagatcctgccgtac
ctggacatcccgttccagcacgccagccccaaggtgctcaagtcgatgaagcgcccggcc
ttcgaagaccgcaccctggcgcgcatcaagagctggcgcgagcaatgccccgaactggtg
atccgctcaaccttcatcgtcggcttcccaggcgagaccgaagaggacttccaatacctg
ctggactggctgaccgaagctcaactcgaccgcgttggctgcttccagtactcgcctgtc
gaaggcgctccggccaacgatttgggcctcgaagaagtgcctgacgacgtcaagcaagag
cgctgggaccgcttcatggctcaccagcaggcgatcagtgcggctcgtctgcaactgcgc
atcggcaaggaaatcgacgtgctgatcgatgaagtcgaagaacaaggctcggtcggccgc
agcttcttcgatgctccggaaatcgacggcagcgtgttcatcgatggcgaccacggcttc
aagccgggcgacaaggttcgttgccgtgtggtagacgccgacgaatacgacatgtgggca
gagcccctctaa
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