Pseudomonas sp. VLB120: PVLB_19350
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Entry
PVLB_19350 CDS
T02897
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
psv
Pseudomonas sp. VLB120
Brite
KEGG Orthology (KO) [BR:
psv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psv03016
]
PVLB_19350 (truD)
Enzymes [BR:
psv01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
PVLB_19350 (truD)
Transfer RNA biogenesis [BR:
psv03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PVLB_19350 (truD)
Prokaryotic type
PVLB_19350 (truD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AGZ36651
UniProt:
A0AAN0VBK0
LinkDB
All DBs
Position
complement(4253200..4254258)
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AA seq
352 aa
AA seq
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MTEHDLLGPRASGQSLGTAVLKAVADDFQVDEVLDIPLSGQGEHLWLWVEKRDLNTEEAA
RRLARAAGVPVRAISYAGLKDRQALTRQWFSLHLPGKADPDLSRAEDDTLRVLKQVRHQR
KLQRGAHSANGFTLRLTALAADHQALDARLELLKQQGVPNYFGTQRFGHGGGNVHDARDW
AQRKALPEQRNVRSRLLSAARSYVFNQVLAARVADGSWQHAQVGDLLAFTDSRSFFPAGE
SECSDPRLAILDLHPTGPMWGEGPSPAAGAPFELESAVGEQHQALCQWLAHAGMSHERRI
LRLPIGSLSWHYPEPDILQLEFVLPAGCFATVVVRELVDLVPAGQTDSPCVF
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaacacgacctgctcggcccgcgtgcatcgggccaatccttgggcaccgcggtg
ctcaaggcggtggccgacgatttccaggtggacgaagtgctggacattccgctgtccggc
cagggcgagcacctgtggctgtgggttgaaaagcgtgacctcaataccgaggaggctgct
cgtcgcctggcacgtgcagctggtgtgccggtccgcgccatcagctacgccggtctgaag
gaccgccaggccctgacccgccagtggttcagcctgcacctgccgggcaaggccgacccg
gacctgtcccgcgccgaagacgacaccctgcgtgtactcaagcaggtgcgccaccagcgc
aaactgcaacgaggcgctcattccgccaacggctttaccctgcgtctcactgcgctggcg
gcagaccaccaggcgctggatgctcggctggaactgctcaagcagcagggggtgcccaac
tacttcggcacgcagcgtttcggccatggtggcggcaacgtgcatgacgcccgggactgg
gcacagcgcaaggcgctaccggaacaacgcaatgtacgttcgcggctgctgtcagcggcg
cgcagctatgtgttcaaccaggtgttggcggctcgggttgccgatggaagctggcagcac
gcgcaggttggcgatttgttggcgttcactgacagccgtagtttctttccggcgggcgag
tcggaatgttccgatccacgcctggcgattctggacttgcatcccaccggcccgatgtgg
ggagagggtccgtcaccggcagccggggcgcccttcgagctggagtcggctgtcggcgag
cagcaccaggcgctttgccaatggctggcccacgcgggaatgagtcacgaacgacgcatc
ctgcggctccctattggcagcttgtcgtggcattatcccgagcctgatatcctgcaactg
gaattcgtccttccggccggatgcttcgccaccgtggtggtgcgcgaactcgtcgatctg
gtgccggcagggcagacggacagcccatgcgtattctga
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