Pseudomonas sp. VLB120: PVLB_19540
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Entry
PVLB_19540 CDS
T02897
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
psv
Pseudomonas sp. VLB120
Pathway
psv00300
Lysine biosynthesis
psv01100
Metabolic pathways
psv01120
Microbial metabolism in diverse environments
psv01230
Biosynthesis of amino acids
Module
psv_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
psv00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PVLB_19540
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
psv01002
]
PVLB_19540
Enzymes [BR:
psv01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
PVLB_19540
Peptidases and inhibitors [BR:
psv01002
]
Metallo peptidases
Family M20
PVLB_19540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
AGZ36689
UniProt:
A0AAN0R591
LinkDB
All DBs
Position
4298450..4299601
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AA seq
383 aa
AA seq
DB search
MTAPAELSPTLQLACDLIRRPSVTPVDADCQAQMMNRLGAVGFQLEPMRIEDVDNFWATH
GTQDGPVLCFAGHTDVVPTGPVQQWQHEPFEALIDADGMLCGRGAADMKGSLASMVVASE
RFVRDYPDHRGKVAFLITSDEEGPAHHGTKAVVERLKARNERLDWCIVGEPSSTTLLGDV
VKNGRRGSLGAKLTVRGKQGHVAYPHLARNPIHLAAPALAELAAEHWDEGNAFFPPTSFQ
ISNLNSGTGATNVVPGELTALFNFRFSTESTVEGLQARVSAILDKHELDWTIDWALSGLP
FLTEPGDLLDAVSASIKDVTGRETQPSTSGGTSDGRFIATMGTQVVELGPVNATIHQVDE
RILASDLDLLTEIYYQTLVRLLA
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgacggccccagccgagctctcgcctacccttcaactggcctgcgacctgatccgtcgc
ccctcggtcacccccgtcgacgctgactgccaggcgcagatgatgaatcgtctgggcgcc
gtcggcttccagctcgagccgatgcgcatcgaggacgtcgacaacttctgggccacccac
ggtacccaggacggtccggtgctgtgcttcgccggccacaccgatgtggtccccaccggc
ccggtacagcaatggcagcatgagcccttcgaggccctgatcgatgccgatggcatgctc
tgcggacgcggcgccgccgacatgaaaggcagcctggcctccatggtggtggccagcgag
cgcttcgtgcgcgactaccccgaccaccgtggcaaggtcgccttcctgatcaccagcgac
gaagaaggcccggcccatcacggcaccaaggccgtggtggagcgcctgaaggcgcgcaac
gagcgcctggactggtgcatcgtcggcgaaccgtcgagcaccaccctgctcggcgacgtg
gtcaagaatggccgtcgtggctcgctcggcgccaagctgaccgtgcgcggtaagcagggc
catgtggcctacccacacctggcacgcaacccgatccacctggcggcacctgccctggcg
gaactggccgccgagcattgggacgagggcaacgcattcttcccacctaccagcttccag
atttccaacctcaactccggcactggcgccaccaacgtcgtgccgggcgagctgaccgcc
ctgttcaacttccgcttctccaccgaatcgaccgtcgaaggcctgcaagcgcgggtctcg
gccatcctcgacaagcacgagctggactggacgatcgactgggcgttgtctggcctgccc
ttcctcaccgagccaggcgacctgctcgatgccgtgtcggccagcatcaaagacgttacc
ggccgcgaaacccagccgtccaccagcggcggcacctcggacggtcgcttcatcgccacc
atgggtacacaggtggtcgaactgggcccggtgaatgccaccatccaccaggtggacgag
cggatcctggccagcgacctcgacctgctgaccgagatctactaccagaccctcgtccgg
ttgctcgcctga
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