Pseudomonas sp. VLB120: PVLB_19675
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Entry
PVLB_19675 CDS
T02897
Symbol
lysS
Name
(GenBank) lysyl-tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
psv
Pseudomonas sp. VLB120
Pathway
psv00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
psv00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PVLB_19675 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
psv01007
]
PVLB_19675 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psv03016
]
PVLB_19675 (lysS)
Enzymes [BR:
psv01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
PVLB_19675 (lysS)
Amino acid related enzymes [BR:
psv01007
]
Aminoacyl-tRNA synthetase
Class II (A)
PVLB_19675 (lysS)
Transfer RNA biogenesis [BR:
psv03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
PVLB_19675 (lysS)
Prokaryotic type
Other AARSs
PVLB_19675 (lysS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
AGZ36716
LinkDB
All DBs
Position
complement(4326269..4327771)
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AA seq
500 aa
AA seq
DB search
MSDLNTQPQDLQQEENALIALRKEKLAAERAKGNAFPNDFRRDSYCNDLQKQYADKTKEE
LEAAAIPVKVAGRIMLNRGSFMVIQDMTGRIQVYVNRKTLPEETLAAVKTWDLGDIISAE
GTLARSGKGDLYVEMTDVRLLTKSLRPLPDKHHGLTDTEQRYRQRYVDLMVNEETRHTFR
VRSQVISHIRKFLIERDFLEVETPMLQTIPGGAAAKPFETHHNALDMAMFLRIAPELYLK
RLVVGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYRDNMDLTEELFRELAQLV
LGSTDVPYGDKVFHFGEPFARLSVFDSILKYNPELTAADLQDVDRAREIAKKAGAKVLGH
EGLGKLQVMIFEELVEHKLEQPHFITEYPFEVSPLARRNDQNPAVTDRFELFIGGREIAN
AYSELNDAEDQAERFLAQVAEKDAGDDEAMHYDADFVRALEYGMPPTAGEGIGIDRLVML
LTNSPSIRDVILFPHMRPQA
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacctcaacacccaaccgcaagacctgcaacaggaagaaaacgccctgatcgcg
ctgcgcaaggaaaaacttgccgccgagcgcgccaaaggcaatgccttccccaacgacttc
cgccgcgacagctactgcaacgacctgcagaaacagtacgcggacaagaccaaggaagag
ctggaagctgcagcgattccggtcaaggtggcaggccgcatcatgctcaaccgtggctcg
ttcatggtcatccaggacatgactggccgcatccaggtctacgtcaaccgcaagaccctg
ccggaagaaaccctggctgcggtcaagacctgggacctgggcgacatcatcagcgccgaa
ggcaccctggcccgttctggcaagggcgacctgtacgtggaaatgaccgatgtgcgcctg
ctgaccaagtcgctgcgcccgctgccggacaagcaccacggcttgaccgacaccgagcag
cgctaccgccagcgctacgtcgacctgatggtcaacgaagaaacccgccacaccttccgc
gttcgttcgcaggtgatctcgcatatccgcaagttcctcatcgagcgcgacttcctcgaa
gtcgaaacgccgatgctgcagaccattccgggcggcgctgcggccaagccgttcgaaacc
caccacaacgcgctggacatggccatgttcctgcgtatcgcgcccgagctgtacctcaag
cgcctggtggtcggtggcttcgagaaagtcttcgagatcaaccgcaacttccgtaacgaa
ggtgtgtcgactcgtcacaaccccgagttcaccatgctcgagttctaccaggcctacgcc
gactaccgcgacaacatggacctcaccgaggaactgttccgcgagctggcgcagctggtc
ctgggttccaccgatgtgccgtacggcgacaaggtattccactttggcgagccgttcgcc
cgcctgtcggtgttcgactcgatcctcaagtacaacccggaactcaccgctgccgacctg
caggacgtcgaccgcgcccgtgaaatcgccaagaaggccggtgccaaggtgctgggccac
gaaggcctgggcaaactgcaggtgatgattttcgaagagctggtcgagcacaagctggag
cagccccacttcatcaccgagtacccgttcgaggtctcgccgctggcccgtcgcaacgac
cagaacccggcggttaccgaccgcttcgagctgttcatcggtggccgcgaaatcgccaat
gcctactccgagctcaatgatgccgaagaccaggccgaacgcttcctggcccaggtggcc
gagaaggatgccggtgacgacgaagccatgcactacgatgccgacttcgtccgcgccctc
gaatacggcatgccgccgaccgcgggcgaaggtatcggtatcgaccgcctggtgatgttg
ctgaccaactcgccgtctatccgtgacgtgatcctgttcccgcacatgcgtccgcaggcc
tga
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