Pseudomonas sp. VLB120: PVLB_19730
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Entry
PVLB_19730 CDS
T02897
Name
(GenBank) spermidine/putrescine ABC transporter ATPase
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
psv
Pseudomonas sp. VLB120
Pathway
psv02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
psv00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PVLB_19730
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psv02000
]
PVLB_19730
Transporters [BR:
psv02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
PVLB_19730
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
AAA_21
SMC_N
AAA_16
AAA_22
AAA_29
nSTAND_NTPase5
crAss_CARG1
Motif
Other DBs
NCBI-ProteinID:
AGZ36727
LinkDB
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Position
4339874..4340929
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AA seq
351 aa
AA seq
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MPLAVQFTQVSRTFGEVKAVDQVSIDIEDGEFFSMLGPSGSGKTTCLRLIAGFEHPSSGS
IRIHGVEATGVPPYQRDVNTVFQDYALFPHMNVRDNIAYGLKVKGVAKAERHARADEALA
MVALSGYGERKPAQLSGGQRQRVALARALVNRPRVLLLDEPLGALDLKLREQMQGELKKL
QRQLGITFVFVTHDQTEALSMSDRVAVFNRGRIEQVDTPRNLYMKPATTFVAEFVGTSNV
LRGELAKQLNGSATPFSIRPEHIRLGDAATTGTEVQVSGLLRDIQYQGSATRYEVQLDSG
QLLAVSHANDRWQDQAQPWQPGQRVQARWPREAMTALRETLLDTPERALPK
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgcccctagccgtccagttcacccaggtttcccgcaccttcggcgaggtcaaggctgtc
gaccaggtcagcatcgacatcgaagacggcgagttcttctccatgctcgggccctcaggc
tcgggcaagaccacctgcctgcgcctgatagcgggcttcgaacatcccagcagcggctcg
atccgtattcacggcgtcgaagccacgggcgtgccgccctaccagcgcgacgtcaacacc
gtgttccaggactacgcactgtttccgcacatgaacgtgcgcgacaacatcgcctatggc
ctcaaggtaaaaggcgtggccaaggccgagcgccatgcccgcgccgacgaggctttggcg
atggtcgccctttctggctatggcgagcgcaaaccggcgcagctttctggtggccagcgt
cagcgtgtggccctggcccgcgcactggtcaatcgcccgcgggtcctgctgctggacgaa
cccctcggcgccctggacctgaagttgcgcgaacagatgcaaggcgagctcaagaagctg
cagcgccagctgggcatcaccttcgttttcgttacccacgaccagaccgaggcgctgtcg
atgtccgaccgcgtggcggtgttcaaccggggtcgcatcgaacaagtcgacaccccacgc
aacctgtacatgaaaccggctaccaccttcgtcgccgagttcgtcggcacgtccaacgtc
ctgcggggcgaactggcgaagcagctcaatggcagcgccacgccgttctccattcgtccg
gagcacatccgcctcggtgacgcggccactacgggaaccgaggtccaggtcagtggcttg
ctgcgcgacatccagtaccagggcagcgccacccgctacgaagtccagctagacagtggc
cagttgttggcggtgagtcatgccaacgatcgctggcaggaccaggctcagccctggcaa
ccgggacagcgagtgcaggcgcgctggccacgcgaggccatgacggccctgcgcgaaacc
ctcctcgatacacctgaacgagccctgccgaaatga
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