Pseudomonas sp. VLB120: PVLB_20000
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Entry
PVLB_20000 CDS
T02897
Name
(GenBank) membrane-bound lytic transglycosylase F
KO
K18691
peptidoglycan lytic transglycosylase F [EC:
4.2.2.29
]
Organism
psv
Pseudomonas sp. VLB120
Brite
KEGG Orthology (KO) [BR:
psv00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
psv01011
]
PVLB_20000
Enzymes [BR:
psv01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
PVLB_20000
Peptidoglycan biosynthesis and degradation proteins [BR:
psv01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
PVLB_20000
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
SBP_bac_3
Lysozyme_like
Motif
Other DBs
NCBI-ProteinID:
AGZ36781
UniProt:
A0AAN0R5D4
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All DBs
Position
4398979..4400436
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AA seq
485 aa
AA seq
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MFAHTALRQRCARWLIATGLFLMLGACVEKPSTLERVKEDGVLRVITRNSPATYFQDRNG
ETGFEYELVKHFADDLGVKLEIETADNLDELFDQLNKPSGPVLAAAGLVSSERRQTQARF
SHPYLEVTPQVIYRNGRPRPTDPKGLVGKKIMVLKGSSHADQLAALKKQYPSLQYEESDA
VEVVDLLRMVDEGQIDLTLVDSNELAMNQVYFPNVRVAFDLGDTRDQRWAVAPGDDNSLL
NEVNEFLDKAQKNGTLQRLKDRYYGHVDVLGYVGAYTFAQHLQQRLPKYEKHFKSYAKVE
KVDWRLLAAIGYQESMWQPEVTSKTGVRGLMMLTQRTAQAMGVSNRLDPKQSIQGGAKYF
MKIKAELDDSIQEPDRTWFALAAYNVGTGHLEDARTLAKREKLNPNKWLDVKKMLPRLSQ
KQWYRQTKYGYARGGEPVHFVANIRRYYDILTWVTQPQLEGQVAEGSLHVPGVNKDKPAD
QSPPM
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgttcgcccacactgctttgcgccagcgctgcgccagatggctcatcgcaaccggactc
tttctgatgctcggtgcctgtgttgaaaaacccagcaccctggagcgcgtgaaggaggat
ggtgtgctgcgcgtgattacccgcaacagcccggccacctacttccaggatcgtaacggc
gaaaccggcttcgaatacgagctggtcaagcatttcgccgatgatctcggcgtgaagctg
gagatcgagaccgccgacaacctcgacgaactgttcgaccaattgaacaaaccctccggt
ccggtgctcgcagcggcgggccttgtcagcagtgaacggcgccagacccaggcccggttc
tcccacccctatctggaagtgaccccacaggtcatctaccgcaacggccgcccacgcccc
accgaccccaaggggctggtcggcaagaaaatcatggtgctcaagggcagcagccacgcc
gaccagctggccgcgctaaaaaaacagtacccgtccctgcaatatgaagagtcggacgcc
gtcgaggtggtcgacctgctgcgcatggtggatgaaggccagatcgacctgaccctggtc
gattccaatgagctggccatgaaccaggtctatttccccaacgtgcgggtggccttcgac
ctgggcgatacccgcgaccagcgctgggcggtggctccgggtgacgacaacagcctgctc
aacgaggtcaacgagttcctcgacaaggcgcagaagaatggcaccttgcagcgcctgaaa
gatcgctactacggccatgtcgacgtactgggctatgtcggtgcatacaccttcgcccag
catctgcaacaacgcctgcccaagtacgagaaacatttcaaaagctacgccaaggtcgag
aaggtcgattggcgcctcctggccgccattggctaccaggaatcgatgtggcagccggaa
gtcacctccaagaccggcgtacgcggcctgatgatgctgacccagcgcaccgcccaggcc
atgggcgtatccaaccggctggatccgaagcaaagcatccagggcggtgccaagtacttc
atgaaaatcaaggcagagctcgatgacagtattcaggagccggaccgcacttggttcgcc
ctggccgcatacaacgtcggcactggccatctggaagatgcccgcaccctggccaagcgc
gagaagctgaacccgaacaagtggttggacgtgaagaaaatgctgccgcgcctgtcgcag
aagcagtggtaccggcagaccaagtacggctatgcccgcggtggcgaaccggtgcatttc
gtggccaacattcgtcgttactacgacatcctcacctgggtgacccagccgcagctcgag
ggccaggtggccgagggcagcctgcatgtgcccggggtcaacaaggacaaaccagcggat
caatcgccgccgatgtga
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