Pseudomonas sp. VLB120: PVLB_20500
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Entry
PVLB_20500 CDS
T02897
Name
(GenBank) extracellular solute-binding protein
KO
K12368
dipeptide transport system substrate-binding protein
Organism
psv
Pseudomonas sp. VLB120
Pathway
psv02010
ABC transporters
psv02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
psv00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PVLB_20500
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
PVLB_20500
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psv02000
]
PVLB_20500
Transporters [BR:
psv02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Dipeptide transporter
PVLB_20500
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
FlhF_N
Motif
Other DBs
NCBI-ProteinID:
AGZ36881
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All DBs
Position
4508379..4510004
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AA seq
541 aa
AA seq
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MLKHAVIPFLVGAGLLAGAPFAQAASNLVFCSEGSPAGFDPGQYTTGTDFDASAETVFNR
LTQFERGGTAVIPGLATKWEVSDDGKTYTFHLREGVKFHTTDYFKPTRAFNADDVLFTFN
RMLDKNHPFRKAYPTEFPYFTDMGMDKNIAKVEKLDDHTVRFTLNEVDAAFIQNLAMSFA
SIQSAEYADQLLKQGKAADINQKPIGTGPFVFSKYQKDAQIRFKGNKDYWKPEDVKIDNL
IFAITTDASVRMQKLKKNECQVTLFPRPADIEPLKEDKNLQMPQQAGFNLGYIAYNVMDK
VKGSNEPNPLSQLKVREALDMAVDKKKIIESVYQGAGQLAVNAMPPTQWSYDDSIKDAAY
DPEKAKQLLKEAGIKEGTEITLWAMPVQRPYNPNAKLMAEMLQSDWGKIGIKAKIVSYEW
GEYIKRSKGGEQGAMLIGWSGDNGDPDNWLGTLYGCDAIDGNNFSKWCYKPYDDLIKQAK
ATSDQGKRTELYQKAQHILKEQVPITPIAHSTVYQPMSAKVKDFKISPFALNSFYGVSVD
K
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgctcaaacacgcagtcattccgttcctggtcggcgcaggcttgctagccggcgccccc
ttcgcccaagccgcatccaacctggtgttctgctccgagggcagtccagccggcttcgac
cctgggcagtacaccacgggaaccgacttcgacgcctcggctgaaaccgtgttcaaccgc
ctgacccagttcgaacgcggcggtaccgcggtcatcccggggctcgcgaccaagtgggaa
gtgtctgacgacggcaagacctataccttccatctgcgtgaaggggtcaagttccacacc
accgactacttcaagccaacccgggcgttcaacgccgacgacgtgctgttcaccttcaac
cgcatgctcgacaagaaccaccccttccgtaaagcctaccccaccgaattcccgtacttc
accgacatgggcatggacaagaacatcgccaaggtggagaaactcgacgatcacaccgtg
cgtttcaccctcaatgaggtcgatgccgcgttcattcagaacctggccatgagcttcgcc
tccattcagtcggccgagtacgccgaccagttgctcaagcaaggcaaggccgccgacatc
aaccagaagcccatcggcacgggcccgttcgtgttcagcaagtaccagaaggacgcgcag
atccgcttcaagggcaacaaggactactggaagcctgaggacgtgaagatcgacaacctg
atcttcgccatcaccaccgatgcctcggtgcgcatgcagaaactgaagaagaacgagtgt
caggtcaccctgttcccgcgcccggcggacatcgagccgctcaaagaggacaagaacctg
cagatgccacagcaggccggtttcaacctgggctatatcgcctacaacgtgatggacaag
gtcaagggcagcaacgaacccaacccgctgtcccagctcaaggtccgcgaagcgctggat
atggccgtggacaagaagaagatcatcgaatcggtctaccagggcgccggccagcttgcc
gtcaacgccatgccgccgacccagtggtcctacgacgacagcatcaaggacgccgcctac
gacccggagaaagccaagcaactgctcaaggaagcgggtatcaaggaaggcaccgagatc
accctgtgggcgatgccggttcaacgtccctacaaccccaacgccaagttgatggccgaa
atgctgcagtccgactggggcaagattggtatcaaggccaagatcgtcagctacgaatgg
ggtgagtacatcaagcgttccaagggcggcgagcagggtgcgatgctgattggctggagc
ggcgacaacggtgacccggacaactggctcggtaccctctacggttgcgatgccattgac
ggcaacaacttctccaagtggtgctacaagccctatgacgacctgatcaagcaggccaag
gccacctccgaccagggcaaacgcaccgagctgtaccagaaggcgcaacacatcctcaag
gaacaggtacccatcacacctatcgcgcactccaccgtgtatcagccaatgagcgccaag
gtgaaggacttcaagatcagtccgttcgcgttgaactcgttctacggcgtcagtgtagac
aagtag
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