Pseudomonas sp. VLB120: PVLB_20680
Help
Entry
PVLB_20680 CDS
T02897
Name
(GenBank) radical SAM protein
KO
K06941
23S rRNA (adenine2503-C2)-methyltransferase [EC:
2.1.1.192
]
Organism
psv
Pseudomonas sp. VLB120
Brite
KEGG Orthology (KO) [BR:
psv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psv03009
]
PVLB_20680
Enzymes [BR:
psv01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.192 23S rRNA (adenine2503-C2)-methyltransferase
PVLB_20680
Ribosome biogenesis [BR:
psv03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
PVLB_20680
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RlmN_N
Radical_SAM
Motif
Other DBs
NCBI-ProteinID:
AGZ36917
LinkDB
All DBs
Position
complement(4552194..4553330)
Genome browser
AA seq
378 aa
AA seq
DB search
MTGKINLLGLTLQEMEKFFESIGEKRFRAGQVMKWIHHFGVDDFAAMTNVGKALREKLEA
VAEIRAPEVVSEDISADGTRKWVVRVASGSCVETVYIPTDDRGTLCVSSQAGCALDCSFC
STGKQGFNSNLTAAEVIGQVWLANKSFGTVPAKIDRAITNVVMMGMGEPLLNFDNVIAAM
KIMMDDLGYGISKRRVTLSTSGVVPMIDELAKHIDVSLALSLHAPNDELRNQLVPINKKY
PLKVLLESCMGYMATLGGKRVLTVEYTLLKDVNDQPEHAAQMIELLRDVPCKINLIPFNP
FPHSGYERPSNNAIRRFQDLLHHGGFNVTTRTTRGDDIDAACGQLVGQVNDRTRRSERYI
AVRQLSADNELQDSAVRH
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgactggcaagatcaacctgttgggcctgaccctccaggaaatggaaaaattcttcgag
tcgatcggggagaagcgttttcgtgccggtcaggtcatgaaatggattcaccactttggc
gtcgacgatttcgccgccatgaccaatgtcggcaaggccttgcgcgaaaagctcgaggcc
gttgctgagattcgggcgccggaagtggtcagtgaagacatttccgccgacggtacccgc
aagtgggtggtccgcgttgcctccggcagctgcgtcgagaccgtctacatccctaccgac
gatcgcggtacgctctgcgtgtcgtcgcaagccggctgtgccctggactgcagtttctgc
tccaccggcaagcaaggcttcaacagcaacctcaccgccgccgaagtcatcggccaagtg
tggcttgccaacaaatccttcgggaccgttcctgccaagatcgaccgcgccatcaccaac
gtggtcatgatgggcatgggcgagcctctgctcaatttcgacaatgtcatcgccgccatg
aagatcatgatggatgatctgggctatggcatttccaagcgtcgtgtcaccttgtccacc
tcgggcgtggtgccgatgatcgacgagctggccaagcacatcgacgtgtcgctggcgctg
tcgctgcacgcgccaaatgacgagctgcgcaatcagctggtgccgatcaacaagaagtac
ccgctcaaggtgctgctggagtcgtgcatgggctatatggccaccctgggtggcaagcgc
gtgctgaccgtcgagtacaccttgctcaaggacgtcaacgaccaacctgagcatgccgcg
cagatgatcgagctgctgcgtgacgtgccgtgcaagatcaacctgattccgttcaacccg
ttcccgcactcgggttacgagcgacccagcaataacgccatccgtcgcttccaggacctg
ttgcaccacggcggcttcaacgtcaccacccgcactacccggggcgacgacatcgacgcg
gcttgcggtcagttggtcgggcaggtcaatgaccgcacccgtcgtagcgagcgctacatc
gccgtccgccagttgtctgccgacaacgagttgcaagacagcgccgtgcgccactga
DBGET
integrated database retrieval system
