Pseudomonas sp. VLB120: PVLB_21010
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Entry
PVLB_21010 CDS
T02897
Name
(GenBank) hypothetical protein
Organism
psv
Pseudomonas sp. VLB120
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
RHS
DUF6531
DUF4595
Motif
Other DBs
NCBI-ProteinID:
AGZ36983
UniProt:
A0AAN0R5Y6
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All DBs
Position
4623524..4628107
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AA seq
1527 aa
AA seq
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MTDIPEKQRPAQAAVVPLDQIGVEDVSRGAAVFDAWLRDISHGYVNLERLKDAAEMLPVI
GNIMALVDAVGDIVNLATADQPDPWDWLSLGINLIGVVPAPPTMAYARKSLRPMLVLARQ
EAKQVLGDSLIEILVGHLNATIIGELDTFLGDAEAHLTEVMTEAAKTGEKLVNNTADAID
AIILGKLDSQGDLKTAATQLQKVSETMTSDPQVSLENAFGALSNAYSAMSKGAANMVMGN
VVPTRVQQAVLGYTAQFRSLGAQMSKQMLNLASLANPNSIASMRLILHKSSTIWHARNPK
AVAGNVKEGSTSQARHQKGDGLLEATANQGPAKGAANDKKNVVCTSTCNRINFAVGSESL
HHTDFSLSGPFPVTWTRTYNSRLDKLDNGILGARWITEFTTCIDVVDKGLLFHDMDGRSH
AFALPKKGKPQYDAVEYFTWVRTGEQQLVLLRGLGRRETYARHGDRFYLTHIQLRSGAGA
MLHYEHRHHDQPVLSDINTYFDNDPNKVHLQLGTLLDDHGHIQGLWQVVDGKPLRQLCGY
HYDGQGDLIGAQDENGAAWHYRYRHHLITRYTDRTARGFNLEWDGSGPHAKAIREWADDG
SFETRLAWDTRIRLTYVTDAQGQETWHYYDAQGYTYRIKHPDGNSEWLFRDARKNVIRHV
HADGSQDRYAYDERSNLLQHIRPDHSVEHYAYDDHDQLIKIRDAEGGLWLRDYDARGNLV
ETTDPLGNKTEFAYTPAGLVKAIKDANGNEKTLAYNDAGQLLAYTDCSGKTSVWAYNAFG
QLIEFADALGNKTAYEYKTGQLAKVSHPDKTEERFDYDAEGRLLAHSDGLDRCTTWSYTA
AGLLAERIDANEHTLRYRWDKLGRLIGLENENESKATFFYDPVGRLLQETGFDGLVTRYQ
YDPYSGRLASTQVGQRRIDLRFDRMNRLVERTARLGDQSQTETFAYDGNGKLIQAINAVS
KLQWFHDEAGNLTREHQHYLATGTPMVAVWQHTYDALNQRISTLRPDGHKVSWLTYGSGH
LLGMTLDHHEMLAYERDDLHREVVRHQGNKLMQTQAWDPAGRLQEQWLGSHDGPSTLLKR
QYRYDAAGQLTNIHDTRRGQLEYQYDPVGRLLQATSRLGVETFAFDPAGNLLDQKTQELN
RPLEADPRRNKLMDNLLREYAGTHYKYDERGNLVHRLQNGAHAHFTWDLFDRLASYSDDK
LKVDFAYDALGRRLYKNSVAHYWDRPEAGTGWNQMQRAKRQRELGCGFTLFGWDGDTLAW
ESSPPRDDGDTGRTVHYLYEPGSFVPVAQALRKRPIVLHRQPDWRQREYDFEQDPLWQTT
MPPQAFDAIAWYHCDHLGTPMELTDPHGNVAWAGQYKAWGEVREERSEWARQHGLGNPIR
FQGQYHDHETGLHYNRYRYYDQKAGHFITQDPISYVGGLNLFLYAPNPTGWIDPRGLARH
DSNGKYCQELKQKIANIKLSVEKRWHELETDEMQLPEYIGPGERLYQTKRGHRKLINKED
NNLRRLELEHELSCSAKYDTKKICKCP
NT seq
4584 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatatccccgaaaaacaacgcccggcccaggcagcggtcgttcccctggaccag
atcggcgtcgaggacgtcagccgtggtgccgccgtgttcgacgcctggctacgcgacatc
agccatggctacgtcaacctcgaacggctcaaggacgccgccgagatgttgccggtcatt
ggcaacatcatggccctggtcgatgccgtgggcgacatcgtcaacctggcgactgccgac
caaccggacccatgggactggctcagcctgggcatcaacctgatcggcgtggtgccagcg
ccacccaccatggcctatgcccgcaaaagcctgcggccgatgctggtgcttgcccgccag
gaagccaagcaggtgctcggcgactcgctgatcgagattctggtcggccacctcaacgcc
acgatcattggcgagctggacacgttcctgggcgatgccgaagcccacctcaccgaggtg
atgaccgaagcggccaagaccggtgagaagctggtcaacaacaccgctgatgccattgac
gcgatcatccttggcaagctcgacagccagggcgacttgaaaacggctgccacgcagttg
cagaaagtcagcgagaccatgacgtcagacccgcaggtctccctcgaaaacgccttcgga
gccctgagcaatgcctactcggcaatgagcaagggcgcggccaacatggtcatgggtaat
gtcgtgcccacccgtgtgcagcaggcagtgctcggctacaccgcgcagttccgcagcctg
ggcgcgcagatgagcaagcagatgctcaacctcgccagtctggccaaccccaactccatc
gccagcatgcgcctgatcctgcacaagagcagcacgatctggcacgcgcgcaaccccaag
gcagtggccggcaacgtcaaggaaggcagcacctcacaagccaggcatcagaaaggtgat
ggcctgctcgaagccacggccaaccagggcccggccaagggtgccgccaacgacaagaag
aacgtcgtctgcaccagcacctgcaaccgcatcaacttcgccgtgggcagcgagtcgttg
caccacaccgacttcagcctgtccggcccgttcccggtcacgtggactcgcacctacaac
tcacgcctcgacaagctggacaacggcatcctcggcgcccgctggatcaccgagttcacc
acctgcatcgacgtggtcgacaaaggcctgctgttccacgacatggacggacgcagccat
gccttcgcgctgccgaaaaagggcaagccgcagtatgacgcagtcgagtacttcacctgg
gtgcgcaccggtgagcagcaactggtgctgctgcgcggcctgggccgccgggaaacctat
gcccgtcacggtgaccgcttctacctgacccatatccagctgcgcagtggcgcgggggcg
atgctgcattacgagcatcgtcaccacgaccagccggtgctgtcggacatcaacacctat
ttcgacaacgacccgaacaaggtccacctgcaactgggcaccctgctcgacgatcacggc
cacattcaaggcttgtggcaggtggtcgacggcaagccgctgcgtcagctgtgcgggtat
cactacgatggccagggcgacctgatcggcgcccaggatgaaaacggcgccgcctggcac
taccgctaccgccatcacctgatcacccgttacaccgatcgcaccgcgcgcggcttcaac
ctggagtgggacggcagcggcccccatgccaaggccattcgcgagtgggccgacgatggc
agcttcgaaacccgcctggcatgggacacgcgcatccgcctgacctacgtcaccgacgcc
cagggtcaggaaacctggcattactacgatgcccaaggctacacctaccggatcaagcac
ccggacggcaactccgaatggctgttccgcgacgcacgcaagaacgtcatccgccacgtc
catgccgacggcagccaggaccgttacgcctacgatgagcgcagcaatctgctgcagcac
atccgccccgatcacagcgtcgagcactatgcctacgacgaccacgaccaactgatcaag
attcgcgatgccgagggcgggctgtggctgcgcgattacgacgcgcgcggcaatctggtc
gagaccaccgatccgctgggcaacaagaccgagttcgcctataccccggcgggcttggtc
aaggcgatcaaggacgccaacggcaacgaaaagacactcgcttacaacgacgccggccag
ttgctggcgtacaccgactgctcaggcaagaccagtgtttgggcctacaacgccttcggc
cagttgatcgagttcgccgatgcactaggcaacaaaaccgcctatgagtacaagaccggt
cagttggccaaggtctcccaccctgacaagaccgaagagcgtttcgactacgacgccgaa
ggtcgcttgctggctcactccgatggccttgatcgttgcaccacttggtcctacaccgcc
gccggcctgctggctgagcgcatcgacgccaacgagcacaccctgcgctaccgctgggac
aagctcggacgcctgatcggcctggagaacgaaaacgaaagcaaggcgacgttcttctac
gatccagtaggtcgtttgctccaggaaaccggattcgatggtctggtgacccgctaccaa
tacgacccgtattccggtcgcctggcctccacccaggtcggccaacgccgcatcgacctg
cgcttcgaccgcatgaaccggctggtcgaacgcaccgcacgcctgggcgatcagagccag
accgaaaccttcgcctacgacggcaacggcaagctgatccaggcgatcaacgccgtcagc
aagctgcagtggttccatgatgaggcgggcaacctgacccgtgagcaccagcactacctc
gcaactggcacgccgatggttgcggtctggcagcacacctacgacgcgctcaaccagcgt
atctcgacccttcgcccggatggacataaggtcagttggttgacgtatggcagcgggcat
ctgctgggcatgaccctcgaccatcacgagatgttagcttacgagcgtgatgacctgcac
cgtgaagtcgtacggcaccagggcaacaagctcatgcaaacccaggcctgggacccggcc
gggcgcctgcaagagcagtggttgggcagccacgatggcccatccacgctgctcaagcgt
cagtaccgttacgacgctgcgggccaattgaccaacatccacgacactcgtcgtggccag
ttggagtatcaatacgatccggttggccgcctgctccaggccaccagccgcctgggcgtc
gagaccttcgccttcgacccggctggcaacctgctggatcagaaaacccaagagctgaac
cgcccgctggaagcggacccacgtcgcaacaagctgatggacaacctgctgcgcgagtac
gccggcacccactacaagtacgacgaacgcggcaacttggtgcaccgcttacaaaacggc
gcgcacgcccacttcacctgggacctgttcgaccggttggccagctacagcgacgacaag
ctcaaggtcgacttcgcctacgacgccttgggtcgacgtctgtacaagaactcggtcgca
cattactgggataggccggaagcgggtaccggctggaaccagatgcagcgagccaagcgc
caacgtgaactgggttgcggattcaccctgttcggctgggacggcgacaccctggcctgg
gaaagctcaccgccaagggacgatggcgataccgggcgtaccgtgcattatctgtatgaa
ccgggcagcttcgtgccggtggcccaggccctgcgcaagcgcccgatcgtgctccacagg
cagccggattggcgccagcgggagtacgacttcgaacaggatccgttgtggcaaacgacg
atgccgccgcaggcgttcgatgcgattgcctggtaccactgcgatcacctcggcacgccg
atggagctgaccgatccgcacggcaacgttgcctgggcggggcagtacaaggcgtggggt
gaggtgcgggaggagcgttcggagtgggccaggcagcatggactgggtaacccgatccgc
ttccaagggcagtaccacgatcacgagacggggctgcactacaaccgctatcggtactat
gatcaaaaagcggggcattttatcactcaggatcctattagctatgtcggcggcttaaat
ctctttttatatgcacctaacccaactggctggattgacccccgaggtctagcacgacat
gactccaatggaaaatattgtcaagagctcaagcaaaaaatcgcgaacatcaagttatca
gtggaaaaaagatggcacgaacttgaaactgacgaaatgcaacttcctgagtatattggg
cctggcgaacgcttatatcagactaagcgaggccacaggaagctgataaacaaagaggac
aacaaccttcgtagattagagctggagcatgagttaagctgctcggcaaaatacgataca
aaaaaaatttgcaagtgcccataa
DBGET
integrated database retrieval system