Pseudomonas sp. VLB120: PVLB_21715
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Entry
PVLB_21715 CDS
T02897
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
psv
Pseudomonas sp. VLB120
Pathway
psv00260
Glycine, serine and threonine metabolism
psv00460
Cyanoamino acid metabolism
psv00630
Glyoxylate and dicarboxylate metabolism
psv00670
One carbon pool by folate
psv00680
Methane metabolism
psv01100
Metabolic pathways
psv01110
Biosynthesis of secondary metabolites
psv01120
Microbial metabolism in diverse environments
psv01200
Carbon metabolism
psv01230
Biosynthesis of amino acids
psv01240
Biosynthesis of cofactors
psv04981
Folate transport and metabolism
Module
psv_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
psv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
PVLB_21715 (glyA)
09102 Energy metabolism
00680 Methane metabolism
PVLB_21715 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PVLB_21715 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
PVLB_21715 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
PVLB_21715 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
PVLB_21715 (glyA)
Enzymes [BR:
psv01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
PVLB_21715 (glyA)
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
Aminotran_5
DegT_DnrJ_EryC1
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
AGZ37122
UniProt:
A0AAN0R673
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All DBs
Position
4783022..4784275
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AA seq
417 aa
AA seq
DB search
MFSRDLTIAKYDAELFEAMQQEALRQEEHIELIASENYTSPAVMEAQGSVLTNKYAEGYP
GKRYYGGCEYVDVVEQLAIDRAKQLFGADYANVQPHAGSQANAAVYLALLSAGDTILGMS
LAHGGHLTHGASVSSSGKLYNAIQYGIDANGLIDYDEVERLAVEHKPKMIVAGFSAYSQV
LDFARFRAIADKVGAYLFVDMAHVAGLVAAGVYPNPVPFADVVTTTTHKTLRGPRGGLIL
ARKNEEIEKKLNSAVFPGAQGGPLEHVIAAKAICFKEALQPEFKAYQQQVVKNAQAMASV
FIERGFDVVSGGTQNHLFLLSLIKQEISGKDADAALGKAFITVNKNSVPNDPRSPFVTSG
LRFGTPAVTTRGFKEAECRELAGWICDILADLNNEAVIDAVREKVKAICKKLPVYGN
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagccgtgatttgaccattgccaagtacgacgccgagctcttcgaagccatgcag
caagaagctctgcgccaggaagagcatatcgagctgatcgcttcggaaaactacaccagc
ccggcagtcatggaagcccagggctcggtcctgaccaacaagtacgccgaaggctaccca
ggcaagcgctactacggtggctgcgaatacgtcgacgtggtcgagcaactggccatcgac
cgtgccaagcagctgttcggcgccgactatgccaacgtccagccgcacgccggttcccag
gccaacgctgccgtctacctggccctgctgtcggccggtgacaccatcctgggcatgagc
ctggcgcacggtggccacctgacccacggtgcttccgtgagctcttcgggcaagctgtac
aacgccatccagtacggcatcgacgccaacggcctgatcgactacgacgaagtcgagcgc
ctggccgtcgagcacaagccgaagatgatcgttgccggcttctcggcctactcgcaggtt
ctggacttcgcccgcttccgcgctatcgccgacaaggtcggtgcctacctgttcgtcgac
atggcccacgttgccggcctggttgccgctggcgtgtacccgaacccggttccgttcgcc
gacgtggtcaccaccaccacccacaagaccctgcgtggtccgcgtggcggcctgatcctc
gctcgcaagaacgaagagatcgagaagaagctgaactccgccgtcttcccaggcgcccaa
ggcggcccgctggagcacgtcatcgcggccaaggccatctgcttcaaggaagccctgcag
cctgagttcaaggcctaccagcagcaagtggtgaaaaacgcccaggccatggccagcgtg
ttcatcgagcgtggtttcgacgtcgtttccggcggcacccagaaccacctgttcctgctg
tcgctgatcaagcaggaaatctccggtaaggacgctgacgccgcgctgggcaaagccttc
atcaccgtcaacaagaactcggtaccgaacgacccacgttcgccgttcgtcacctcgggc
ctgcgtttcggcaccccagccgtcaccacccgtggtttcaaggaagccgagtgccgcgag
ctggccggctggatctgcgacatcctggctgacctgaacaacgaagcggtcatcgatgcc
gtgcgtgagaaggtcaaggccatctgcaagaagctgccggtttacggcaactga
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