KEGG   Pseudomonas sp. VLB120: PVLB_21715
Entry
PVLB_21715        CDS       T02897                                 
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
psv  Pseudomonas sp. VLB120
Pathway
psv00260  Glycine, serine and threonine metabolism
psv00460  Cyanoamino acid metabolism
psv00630  Glyoxylate and dicarboxylate metabolism
psv00670  One carbon pool by folate
psv00680  Methane metabolism
psv01100  Metabolic pathways
psv01110  Biosynthesis of secondary metabolites
psv01120  Microbial metabolism in diverse environments
psv01200  Carbon metabolism
psv01230  Biosynthesis of amino acids
psv01240  Biosynthesis of cofactors
psv04981  Folate transport and metabolism
Module
psv_M00975  Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:psv00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    PVLB_21715 (glyA)
  09102 Energy metabolism
   00680 Methane metabolism
    PVLB_21715 (glyA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    PVLB_21715 (glyA)
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    PVLB_21715 (glyA)
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    PVLB_21715 (glyA)
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    PVLB_21715 (glyA)
Enzymes [BR:psv01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     PVLB_21715 (glyA)
SSDB
Motif
Pfam: SHMT Aminotran_1_2 Beta_elim_lyase Cys_Met_Meta_PP Aminotran_5 DegT_DnrJ_EryC1 OKR_DC_1
Other DBs
NCBI-ProteinID: AGZ37122
UniProt: A0AAN0R673
LinkDB
Position
4783022..4784275
AA seq 417 aa
MFSRDLTIAKYDAELFEAMQQEALRQEEHIELIASENYTSPAVMEAQGSVLTNKYAEGYP
GKRYYGGCEYVDVVEQLAIDRAKQLFGADYANVQPHAGSQANAAVYLALLSAGDTILGMS
LAHGGHLTHGASVSSSGKLYNAIQYGIDANGLIDYDEVERLAVEHKPKMIVAGFSAYSQV
LDFARFRAIADKVGAYLFVDMAHVAGLVAAGVYPNPVPFADVVTTTTHKTLRGPRGGLIL
ARKNEEIEKKLNSAVFPGAQGGPLEHVIAAKAICFKEALQPEFKAYQQQVVKNAQAMASV
FIERGFDVVSGGTQNHLFLLSLIKQEISGKDADAALGKAFITVNKNSVPNDPRSPFVTSG
LRFGTPAVTTRGFKEAECRELAGWICDILADLNNEAVIDAVREKVKAICKKLPVYGN
NT seq 1254 nt   +upstreamnt  +downstreamnt
atgttcagccgtgatttgaccattgccaagtacgacgccgagctcttcgaagccatgcag
caagaagctctgcgccaggaagagcatatcgagctgatcgcttcggaaaactacaccagc
ccggcagtcatggaagcccagggctcggtcctgaccaacaagtacgccgaaggctaccca
ggcaagcgctactacggtggctgcgaatacgtcgacgtggtcgagcaactggccatcgac
cgtgccaagcagctgttcggcgccgactatgccaacgtccagccgcacgccggttcccag
gccaacgctgccgtctacctggccctgctgtcggccggtgacaccatcctgggcatgagc
ctggcgcacggtggccacctgacccacggtgcttccgtgagctcttcgggcaagctgtac
aacgccatccagtacggcatcgacgccaacggcctgatcgactacgacgaagtcgagcgc
ctggccgtcgagcacaagccgaagatgatcgttgccggcttctcggcctactcgcaggtt
ctggacttcgcccgcttccgcgctatcgccgacaaggtcggtgcctacctgttcgtcgac
atggcccacgttgccggcctggttgccgctggcgtgtacccgaacccggttccgttcgcc
gacgtggtcaccaccaccacccacaagaccctgcgtggtccgcgtggcggcctgatcctc
gctcgcaagaacgaagagatcgagaagaagctgaactccgccgtcttcccaggcgcccaa
ggcggcccgctggagcacgtcatcgcggccaaggccatctgcttcaaggaagccctgcag
cctgagttcaaggcctaccagcagcaagtggtgaaaaacgcccaggccatggccagcgtg
ttcatcgagcgtggtttcgacgtcgtttccggcggcacccagaaccacctgttcctgctg
tcgctgatcaagcaggaaatctccggtaaggacgctgacgccgcgctgggcaaagccttc
atcaccgtcaacaagaactcggtaccgaacgacccacgttcgccgttcgtcacctcgggc
ctgcgtttcggcaccccagccgtcaccacccgtggtttcaaggaagccgagtgccgcgag
ctggccggctggatctgcgacatcctggctgacctgaacaacgaagcggtcatcgatgcc
gtgcgtgagaaggtcaaggccatctgcaagaagctgccggtttacggcaactga

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