Pseudomonas sp. VLB120: PVLB_23475
Help
Entry
PVLB_23475 CDS
T02897
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
psv
Pseudomonas sp. VLB120
Pathway
psv03030
DNA replication
psv03430
Mismatch repair
psv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PVLB_23475
03430 Mismatch repair
PVLB_23475
03440 Homologous recombination
PVLB_23475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psv03032
]
PVLB_23475
03400 DNA repair and recombination proteins [BR:
psv03400
]
PVLB_23475
Enzymes [BR:
psv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PVLB_23475
DNA replication proteins [BR:
psv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PVLB_23475
DNA repair and recombination proteins [BR:
psv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PVLB_23475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AGZ37474
LinkDB
All DBs
Position
5169527..5170237
Genome browser
AA seq
236 aa
AA seq
DB search
MSLFTWLRPNAPLLEASLRQRLSQLPKPAPLGVCTLREQRWVVLDLETSGLNTNRDQVLS
IGAVAIEDGAIDFAQQFERTLRRPEHKTNASVLIHGLGPSALAAGCDPAEALLDLLEFIG
DSPVLAFHAPFDQRMLARSLKESLGYRLQHPFIDIAELAPLLNPDTVLREASLDDWLACF
GLQVDERHHASADAQATAELALILFSQARRQKLDSPLQLEQRLRVMRRRKAHHYGL
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgttcacctggttgcgccccaacgcgcccctgctggaggcctcgctgcgccag
cgcctgtcgcagttgcccaagcctgcgccactgggcgtctgtaccctgcgtgagcagcgc
tgggtggtgctggacctggaaaccagcggcctgaacaccaaccgcgatcaggtgttgtcg
atcggcgcggtggcgatcgaggatggcgccatcgactttgcccaacagttcgagcgcacc
ttgcgccgcccggagcacaagaccaacgccagcgtgctgatccacggcctcggccctagc
gccctggctgccggatgcgacccggccgaagcattgctcgaccttctcgagttcattggc
gacagcccggtgctggctttccatgcgcctttcgatcaacgcatgttggcccgctcgctg
aaggaaagtcttggctatcgcctgcagcatcccttcatcgacattgccgaactggccccc
ctgctcaaccccgacaccgtgctgcgcgaagccagcctggacgactggttggcgtgcttc
ggcctgcaagtggacgaacgtcatcatgccagtgccgatgcccaggcgacggccgagctg
gccctgatcctgttcagccaggcccgccgccagaaattggatagcccgttgcaattggag
cagcgcttgcgcgtgatgcgtcggcgcaaggctcatcattacggtctttag
DBGET
integrated database retrieval system
