Pseudomonas sp. VLB120: PVLB_23665
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Entry
PVLB_23665 CDS
T02897
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
psv
Pseudomonas sp. VLB120
Pathway
psv00260
Glycine, serine and threonine metabolism
psv00460
Cyanoamino acid metabolism
psv00630
Glyoxylate and dicarboxylate metabolism
psv00670
One carbon pool by folate
psv00680
Methane metabolism
psv01100
Metabolic pathways
psv01110
Biosynthesis of secondary metabolites
psv01120
Microbial metabolism in diverse environments
psv01200
Carbon metabolism
psv01230
Biosynthesis of amino acids
psv01240
Biosynthesis of cofactors
psv04981
Folate transport and metabolism
Module
psv_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
psv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
PVLB_23665
09102 Energy metabolism
00680 Methane metabolism
PVLB_23665
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PVLB_23665
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
PVLB_23665
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
PVLB_23665
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
PVLB_23665
Enzymes [BR:
psv01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
PVLB_23665
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Beta_elim_lyase
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
AGZ37512
UniProt:
A0AAN0R6Y3
LinkDB
All DBs
Position
complement(5215796..5217049)
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AA seq
417 aa
AA seq
DB search
MFSKQDQIQGYDDALLAAMNAEEQRQEDHIELIASENYTSKRVMQAQGSGLTNKYAEGYP
GKRYYGGCEHVDKVEALAIERAKQLFGADYANVQPHSGSSANGAVYLALLQAGDTILGMS
LAHGGHLTHGAKVSSSGKLYNAVQYGIDTNTGLIDYDEVERLAVEHKPKMIVAGFSAYSK
TLDFPRFRAIADKVGALLFVDMAHVAGLVAAGLYPNPIPFADVVTTTTHKTLRGPRGGLI
LAKSNEEIEKKLNAAVFPGAQGGPLMHVIAAKAVCFKEALEPEFKAYQKQVIENAQAMAQ
VFVDRGYDVVSGGTDNHLFLVSLIRQGLTGKDADAALGRAHITVNKNAVPNDPQSPFVTS
GLRIGTPAVTTRGFKVAQCVALAGWICDILDNLGDADVEADVAKNVAALCADFPVYR
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagcaagcaagaccagatccaaggttatgacgatgcactgctggcggcgatgaat
gccgaagaacagcgtcaggaagatcacatcgagctgatcgcctcggagaactacaccagc
aagcgcgtgatgcaggcccagggcagcggcctgaccaacaagtacgccgagggctaccca
ggcaagcgttactacggcggctgcgagcatgtcgacaaagtcgaagcgctggccatcgag
cgcgccaagcagctgttcggcgccgactacgccaacgtccagccacactctggctcctcg
gccaacggcgctgtctacctggccctgctgcaggccggcgacaccatcctgggcatgagc
ctggcccatggcggccacctgacccacggcgccaaggtgtcgtcctcgggcaagctgtac
aacgccgtccaatacggcatcgacaccaacaccggcctgatcgactacgacgaagtcgag
cgcctggctgtcgagcacaagccgaagatgatcgttgctggcttctcggcctactccaag
accctcgacttcccacgcttccgcgccatcgccgacaaagtgggtgcgctgctgttcgtc
gacatggcccatgtggccggcctggtcgccgctggcctgtacccgaacccgattccgttc
gccgatgtggtcaccaccaccacccacaagaccctgcgcggccctcgtggcggcctgatc
ctggccaagtcgaacgaagagatcgagaagaaactcaacgcggccgtcttcccaggcgcc
cagggcggtccgctgatgcacgtcatcgctgccaaggccgtgtgcttcaaggaagcgctg
gaacctgaattcaaggcctaccagaaacaagtcatcgagaacgcccaggccatggcccag
gtgttcgtcgatcgcggctacgacgtggtctccggcggcactgacaaccacctgttcctg
gtcagcctgattcgtcagggcctgaccggcaaagacgccgacgccgccctgggtcgcgcc
cacatcaccgtcaacaagaacgccgtaccgaacgacccgcagtcgccgttcgtcacctct
ggcctgcgcatcggtaccccggccgtcaccacccgcggcttcaaggttgcccagtgcgtg
gccctggccggctggatctgcgacatcctcgacaacctcggcgatgccgacgtcgaagcc
gatgtggccaagaacgtcgccgccctgtgcgccgatttcccggtttaccgctga
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