Pseudomonas sp. VLB120: PVLB_23845
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Entry
PVLB_23845 CDS
T02897
Name
(GenBank) A/G-specific adenine glycosylase
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
psv
Pseudomonas sp. VLB120
Pathway
psv03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
psv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PVLB_23845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psv03400
]
PVLB_23845
Enzymes [BR:
psv01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
PVLB_23845
DNA repair and recombination proteins [BR:
psv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PVLB_23845
Prokaryotic type
PVLB_23845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX_4
HhH-GPD
HHH
HHH_8
EndIII_4Fe-2S
HHH_5
Virulence_fact
Motif
Other DBs
NCBI-ProteinID:
AGZ37548
LinkDB
All DBs
Position
5256134..5257201
Genome browser
AA seq
355 aa
AA seq
DB search
MSPEQFSSAVLDWYDQHGRHDLPWQQGITPYRVWVSEIMLQQTQVSTVLNYFDRFMQALP
TVQALAVAPEDEVLHLWTGLGYYTRARNLQKAAKMVVEQYGGEFPRSVEQLTELPGIGRS
TAGAIASISMGIRAPILDGNVKRVLARYTAQAGYPGEPKVANALWATAERFTPQQRANHY
TQAMMDMGATLCTRSKPSCLICPLQRGCEAHLHGEETRYPEPKPRKALPQRRTLMPLLAN
HEGAILLYRRPSSGLWGGLWSLPELDDIEQLDDLAYQHGLRLADSRALEGLTHTFSHFQL
AIEPWLVRVDPVGQPVAEADWLWYNLATPPRLGLAAPVKKLLKRAADELIAGEAR
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgagccccgagcagttctccagcgccgtgctggattggtacgaccagcacggtcggcat
gacctgccctggcaacagggcatcaccccgtatcgggtgtgggtgtcggaaatcatgttg
caacagacccaggtgagcaccgtgctcaactacttcgaccgcttcatgcaggccctgccc
accgtgcaggccctggcggtcgcgccggaggacgaagtgctgcacctatggacgggcctg
ggctactacacccgcgcccgcaacttgcagaaagccgcgaaaatggtggtcgagcagtac
ggcggcgagttcccgcgcagcgtcgagcagctcaccgagttgccgggtatcggccgctcg
acggccggcgccatcgccagcatcagcatgggcatccgcgcaccgatcctcgatggcaac
gtcaagcgcgtgctcgcccgctacaccgctcaagctggctacccaggcgagccaaaagtg
gccaatgcactgtgggccaccgccgagcgcttcaccccgcagcagcgcgccaaccactac
acccaggcgatgatggacatgggcgcaacgctgtgcacccgcagcaagcccagttgcctg
atctgcccattgcagcgcggctgcgaggcgcacctgcacggcgaagaaacccgctacccc
gaacccaagccgcgcaaagccctgccccagcgccgcacgctgatgccgctgctggccaac
cacgaaggcgccattctgctgtatcgccgcccctccagcggcctgtggggtggcctgtgg
agcctgcccgaactggacgacatcgaacagctcgacgacctggcctaccaacacggcttg
cgcctggccgacagccgcgcgctagaaggcctgactcacactttcagccatttccagctg
gcgatcgagccttggctggtccgcgtcgacccggtcggccagcccgtggccgaggccgac
tggctctggtataacctcgccaccccgccgcgcctgggcctcgccgccccggtcaagaag
ctgctcaaacgcgcggccgacgaactgattgcaggagaagcacgatga
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