Pseudomonas sp. VLB120: PVLB_24340
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Entry
PVLB_24340 CDS
T02897
Name
(GenBank) RNA-binding S1 domain-containing protein
KO
K06959
protein Tex
Organism
psv
Pseudomonas sp. VLB120
Brite
KEGG Orthology (KO) [BR:
psv00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
PVLB_24340
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_central_region
Tex_YqgF
Tex_N
HHH_3
HHH_9
S1
S1_RRP5
YqgF
HHH_7
T2SSK
HHH_6
PsbU
Motif
Other DBs
NCBI-ProteinID:
AGZ37647
UniProt:
A0AAN0R786
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Position
5344612..5346939
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AA seq
775 aa
AA seq
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MDSINSRIAEELGVRPQQVEAAVGLLDEGSTVPFIARYRKEVTGSLDDTQLRHLEERLRY
LRELDERRASILASIEEQGKLTPELAREIKLADTKTRLEDLYLPYKQKRRTKGQIALEAG
LGELADGLFNDPQLTPETEAARFVNADKGVADVKAALEGAKYILMERFAEDAALLDKLRN
FLKQEAVLSARVVAGKEEEGAKFRDYFAHDELLRNAPSHRALAIFRGRNEGVLSASLKVG
EELPGTLHPCELMIGNHVGIENRNRPADKWLGEVVRWTWKVKLYTHLETDLFGELRDNAE
GEAINVFAHNLHDLLLAAPAGPRATLGFDPGLRTGCKIAVVDATGKLLDHTTVYPHAPKN
DWDRTISIMAALCAKHSVELIAIGNGTASRESDKLVAELVKKYPALKITKIMVSEAGASV
YSASELAAREFPDLDVSIRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQVKLARG
LDAVVEDCVNAVGVDVNTASVALLTRISGLNATLAQNIVAHRDANGPFATRAALKKVSRL
GEKTFEQAAGFLRVMNGDNPLDASAVHPEAYPLVQRIAADTGRDIRSLIGDSAFLKRLDP
KKFTDETFGLPTVTDILQELDKPGRDPRPEFKTATFQDGVEDLKDLEPGMILEGVVTNVT
NFGAFVDIGVHQDGLVHISALSEKFIKDPREAVKAGDVVKVKVMEVDIPRKRVGLSMRMS
DTPGEKVEGNRGGGNRGNGGNRSQQAPRQRETATAAPANNAMAALFANAKQLKKK
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atggacagcatcaacagccgtatcgccgaggaactgggcgtacgcccccagcaggtcgaa
gcggccgtgggcctgttggacgaaggctcgaccgtgcccttcatcgcccgttaccgcaag
gaagtgaccggcagcctggacgacacgcaattgcgccacctggaagagcgcctgcgttac
ctgcgcgagctcgacgagcgccgcgccagcatcctggccagcatcgaggaacagggcaag
ctgaccccggaactggcccgcgagatcaagctcgccgacaccaagacccgcctcgaagac
ctctacctcccctacaagcaaaaacgccgcaccaagggccagatcgccctggaagccggc
ctgggcgagctggccgacggcctgttcaacgacccgcagctgacgccggaaaccgaggcc
gcgcgcttcgtcaacgccgacaagggcgtcgccgacgtcaaggccgctttggaaggcgcc
aagtacatcctgatggagcgcttcgccgaagacgccgccctgctcgacaagctgcgcaac
ttcctcaagcaggaagcggtgctcagtgcacgcgtggtggccggcaaggaagaggaaggc
gccaagttccgcgattacttcgcccacgacgagttgctgcgcaacgctccgtcgcaccgc
gccctggccatcttccgtggccgtaacgaaggtgtgctcagcgcctcgctgaaagtcggc
gaagagctgcccggcaccctgcacccgtgcgaactgatgatcggcaaccacgtcggcatc
gagaaccgcaaccgcccggccgacaagtggctgggcgaggtggtgcgctggacctggaag
gtaaagctgtacacccacctggaaaccgacctgttcggcgagctgcgcgacaacgccgaa
ggcgaggcgatcaacgtcttcgcccacaacctgcatgacctgctgctggccgccccagct
ggcccacgcgctaccctgggcttcgacccgggcctgcgcaccggctgcaagatcgccgtg
gtcgacgccaccggcaagctgctggaccacaccaccgtgtacccgcacgcaccgaagaat
gactgggaccgcaccatttccatcatggccgccctgtgcgccaagcattcggtggaactg
atcgccatcggcaacggcaccgccagccgcgagagcgacaagctggtggccgagctggtg
aaaaagtaccccgcactgaagatcaccaagatcatggtctccgaggccggcgcttcggtg
tattcggcatcggaactggctgcccgcgaattcccggacctggacgtgtcgatccgtggc
gccgtgtcgatcgcccgccgcctgcaggacccgctggccgaactggtcaagatcgacccg
aaatccatcggtgtcggccagtaccagcacgacgtgtcgcaggtgaagctggctcgcggc
ctggacgccgtggtcgaggactgcgtgaacgccgtgggcgtggacgtcaacacggcttcc
gttgcgctgttgacccgcatctccggcctgaacgccacgctggcgcagaacatcgtcgcc
caccgcgacgccaatggcccgttcgccacgcgtgccgcgctgaagaaagtcagccgcctg
ggcgaaaaaaccttcgagcaggccgccggcttcctacgggtgatgaacggcgacaacccg
ctggatgcctccgcggttcacccggaggcctatccgctggtgcaacgcatcgccgccgac
accggccgcgacattcgctcgctgatcggcgacagcgccttcctcaagcgcctcgacccg
aagaagttcaccgatgaaaccttcggcctgccgaccgtcaccgacattctgcaggaactg
gacaagcccggccgcgacccacgccccgagttcaagaccgccaccttccaggacggcgtc
gaagacctcaaggacctggagcccggcatgatcctcgaaggcgtggtcaccaacgtcacc
aactttggtgccttcgtcgacatcggcgtgcaccaggatggcctggtgcacatctcggcg
ctttcggagaagttcatcaaggacccacgtgaagcggtcaaggccggcgatgtggtcaag
gtcaaggtcatggaagtggacatcccgcgcaagcgcgtcggcctgtccatgcgcatgagc
gataccccgggcgagaaggtcgagggcaaccgtgggggcggcaaccgcggcaacggcggc
aaccgttcgcagcaggcgccccgccagcgtgaaaccgcgacagccgcgccggccaacaac
gccatggcggcattgttcgccaacgccaagcagctgaagaagaagtaa
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