Entry |
|
Name |
(GenBank) outer membrane porin
|
KO |
K18093 | imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-] |
|
Organism |
psv Pseudomonas sp. VLB120
|
Pathway |
|
Module |
psv_M00745 | Imipenem resistance, repression of porin OprD |
|
Brite |
KEGG Orthology (KO) [BR:psv00001]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PVLB_24840
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PVLB_24840
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:psv02000]
PVLB_24840
01504 Antimicrobial resistance genes [BR:psv01504]
PVLB_24840
Transporters [BR:psv02000]
Other transporters
Pores ion channels [TC:1]
PVLB_24840
Antimicrobial resistance genes [BR:psv01504]
Gene sets
beta-Lactam resistance modules
Imipenem resistance, repression of porin OprD [MD:M00745]
PVLB_24840
|
SSDB |
|
Motif |
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Other DBs |
|
LinkDB |
|
Position |
5451873..5453135
|
AA seq |
420 aa
MHNGTLPPRALLIAFAALGPAFALADEPGWSLLSRNYFLHSDFRSPSPSGQSYRQEWAQG
FIGEIRSGFTEGTVGLGVDAHGFLGLKLDGGRGHAGTGLLPRDSDGRAESDYSSAGAALK
MRLGNTVLRYGEMTVETPVFDTGDKRLHPEYATGWLLENIDLTDWRVQAGRFTAFNSQDN
SSTHDDFAGYGASTHGRAISLAGVTFAPNGPFGGALFASQLQDTWNQAYLNLNLAEGRWR
LDGNLYHTRDTGAASAGNIDTLAYSLAAKYRAGAQAVTLAYQKVEGDTPFDFVGGDSIYL
ANSIKYADFNGPGERSWQLRYDLDFATLGVPGLSVMGRYVSGRGIDGSHAPAAGAYVSQQ
GKGGRHWERDLDLKYVVQSGAAKDLGVSLSHVSHRANEAQAGDDIDRLYLIIEYPLKGVF |
NT seq |
1263 nt +upstreamnt +downstreamnt
atgcataacggaaccttaccccctcgcgccctgctgatcgccttcgccgccctcggccct
gcttttgcactggccgacgagcctggctggtcactgctcagccgcaactatttcttgcac
agtgacttccgctcgccgtcacccagcggccaaagctatcgccaggaatgggcccagggt
ttcatcggtgaaattcgctcgggcttcaccgagggcacggtcggcctcggtgtggatgcc
cacggtttcctggggctcaagctcgacggtggacgcggtcacgccggcacgggtctgttg
ccccgagacagcgacgggcgcgctgagtctgactactccagcgcaggcgctgcgctgaaa
atgcgcctgggcaacaccgtgctgcgctatggcgaaatgacagtggaaacgccagtgttc
gataccggcgataagcgcctgcacccggagtacgccacaggctggttactggaaaacatc
gacttaaccgactggcgcgtgcaagccgggcgattcaccgcgttcaatagtcaagacaac
agttcgacgcacgacgacttcgccggctacggcgccagcacccatgggcgcgcgatcagc
ctggcgggtgtcactttcgcccccaacggtccgtttggcggagcactgttcgcctcgcag
ctgcaggacacctggaaccaggcctacctcaacctgaacctggcggaaggccgctggcgg
ctggacggcaacctctatcacacccgcgataccggtgcagccagtgcaggcaacatcgac
accctggcttacagtctggcggccaagtacagagccggcgcccaggccgtgacccttgcc
tatcagaaggtcgagggcgacaccccgttcgacttcgtcggcggcgactccatctacctc
gccaactcgatcaagtatgcagacttcaacggacccggcgaacgctcgtggcaactgcgc
tacgacctggatttcgccaccctcggtgtgcccggcctgagcgtgatggggcgctacgtc
agcgggcgcggcatcgatggcagccatgctccggcggcgggtgcctatgtgtcgcaacag
ggcaaaggaggacgccactgggagcgtgacctggacctcaagtacgtggtgcagtccggc
gctgccaaggacctcggcgtgtcgctgtcccacgtcagccatcgcgccaacgaggcccag
gcgggcgacgatatcgaccgcctgtacctcatcatcgaatacccgctcaaaggggttttc
tga |