Pseudomonas sp. VLB120: PVLB_24890
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Entry
PVLB_24890 CDS
T02897
Name
(GenBank) LysR family transcriptional regulator
KO
K03566
LysR family transcriptional regulator, glycine cleavage system transcriptional activator
Organism
psv
Pseudomonas sp. VLB120
Brite
KEGG Orthology (KO) [BR:
psv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psv03000
]
PVLB_24890
Transcription factors [BR:
psv03000
]
Prokaryotic type
Helix-turn-helix
LysR family
PVLB_24890
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_IclR
MarR_2
HTH_24
EryCIII-like_C
HTH_11
HTH_AsnC-type
Motif
Other DBs
NCBI-ProteinID:
AGZ37757
UniProt:
A0AA86DXT1
LinkDB
All DBs
Position
5465234..5466124
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AA seq
296 aa
AA seq
DB search
MSKRLVPSMTALQCFEAAARHLSFTRAAEELHLTQSAVSKQVAQLEDMLRHHLFLRIRRR
LQLTPAGSLYLAEVNKILTQVDMSSRYVLTYGEQTEILKVATQPSFGVRWLIPHLKGFGK
RHPNIHLDIRNEMEPFALLQGSADVVFFYGQGTWPGATCLELFREDVVPVCAPELLAGRT
LADAAELAELVLLQSTSRPEAWHEWFLELGLHSVSAYHGPRFDTFYMALSAAQAGCGVAL
VPKYLAAKELAEGSLVIPWDHAMRSAGAHYLAYAEHAAEVPKVRALMAWINEQLSV
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaacgcctggttccctccatgaccgccctgcagtgcttcgaagccgcagcccgt
cacttgagttttacccgtgccgccgaagagctgcacctgacccagagcgcggtcagtaaa
caggtggcacagcttgaggacatgctgcgtcaccacctgttcctgcgtattcgccggcgt
ctgcaactcacgcctgccggcagcctgtacctggccgaggtgaacaagatcctgacccag
gtcgacatgtccagccgctatgtcctgacctatggcgagcagaccgagatattgaaggta
gccactcaaccgagttttggcgtgcgctggctgatcccgcacctcaagggcttcggcaaa
cgccacccgaatatccacttggatatccgcaacgaaatggagccttttgccctgctgcaa
ggctcggccgatgtggtgttcttctacggccagggcacctggccgggcgctacctgcctt
gaactgttccgtgaggacgtggtgccggtatgcgcgccggaactgctggccggccgaacc
ctggccgatgccgctgaactggcggaactggtgctgttgcaaagcacatctcggccagag
gcctggcatgaatggttcctggagcttggactgcacagtgtcagcgcctaccacggacca
cgcttcgatacgttctacatggcattaagcgcggcgcaggcggggtgtggagtggcgctg
gtgcccaaatacctggctgccaaggagttggccgagggaagcctggtcatcccctgggat
catgcgatgcgtagcgcgggggcgcattacctggcgtatgccgaacatgcggccgaggtg
ccgaaggtgcgagcgctgatggcgtggatcaacgagcagttgtcggtttga
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