Pseudomonas sp. VLB120: PVLB_25715
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Entry
PVLB_25715 CDS
T02897
Symbol
trmE
Name
(GenBank) tRNA modification GTPase TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
psv
Pseudomonas sp. VLB120
Brite
KEGG Orthology (KO) [BR:
psv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psv03016
]
PVLB_25715 (trmE)
Transfer RNA biogenesis [BR:
psv03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
PVLB_25715 (trmE)
Prokaryotic type
Methyltransferases
PVLB_25715 (trmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
AIG1
Ras
RsgA_GTPase
ABC_tran
AAA_28
Roc
DUF4702
SRPRB
AAA_18
Golgin_A5
Motif
Other DBs
NCBI-ProteinID:
AGZ37920
LinkDB
All DBs
Position
complement(5640042..5641412)
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AA seq
456 aa
AA seq
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MNTVRETIAAIATAQGRGGVGIVRLSGPLAAKAGQMITGRTLTPRHAHYGPFRDEDGLVL
DEGIALFFPGPNSFTGEDVLELQGHGGPVVLDMLLQRCVQVGCRLARPGEFSERAFLNDK
LDLAQAEAIADLIEASSSQAARNALRSLQGEFSKRVHSLTEALIALRIYVEAAIDFPEEE
IDFLADGHVLSMLDAVRSELSTVQREAGQGALLRDGMTVVIAGRPNAGKSSLLNRLAGRE
AAIVTDIAGTTRDILREHIHIDGMPLHVVDTAGLRDTDDHVEKIGVERALKAIGEADRVL
LVVDSTAPEANDPFALWPEFLDQRPDPAKVTLIRNKADLSGERVGLEQCDDGHVTITLSA
KGDDQGLQMLRDHLKACMGYEQTAESGFSARRRHLDALRQASAHLEHGRDQLTLAGAGEL
LAEDLRQAQQALGEITGAFSSDDLLGRIFSSFCIGK
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgaacactgtgcgtgaaaccatcgctgccatcgccactgcccagggccgtggcggggta
ggtatcgtcaggctgtccgggccgttggccgccaaggctggccaaatgatcaccgggcgt
acactgacaccgcgccacgcccattacggtccattccgcgacgaggatgggttggtgctg
gacgagggcattgcgctgttcttccctgggccgaattccttcaccggtgaggatgtgctc
gagttgcaggggcatggtggcccggtggtgctggacatgctgctccagcgctgcgtgcag
gtgggttgccgtttagcgcgcccaggggagttcagcgaacgggcatttctcaatgacaag
ctcgacctggctcaggccgaagcgattgccgacctgatcgaagccagctccagccaggcc
gcacgcaatgccttgcgctctctgcagggtgaattctccaaacgtgtgcacagcctgacc
gaagcgctgatcgccctgcggatctatgtcgaggcggctatcgactttcccgaggaggag
atcgatttcctcgccgatggccatgtgctgtcgatgctcgatgcggtgcgcagcgagttg
tccacagtgcaacgcgaggccgggcagggcgcactgttgcgtgacggcatgacggtagtc
atcgccggtcgaccgaacgctggcaagtcgagcctactcaaccgcctggctggcagggaa
gccgcgatcgtgaccgatattgcaggcaccactcgggatatcctgcgggaacatatccac
atcgatggtatgccgctgcatgtggtcgacactgccgggttgagggataccgacgaccat
gtggaaaaaatcggcgtggaacgtgctctgaaggccatcggtgaagcggaccgtgtcctg
ttggtggtggactccaccgcacccgaggcgaacgatccgtttgcattgtggccagagttc
ctcgatcagcggccagaccccgccaaggtgacgctgatccgtaacaaggctgacctcagc
ggcgagcgggtagggctggagcagtgcgacgacggccacgtgacgatcaccctgagtgcc
aagggcgacgatcaaggcctgcagatgctgcgcgatcacctgaaagcgtgcatgggctat
gagcagaccgctgaaagcggcttcagcgcccgtcgccggcatctggatgcgctgcgtcaa
gcgagtgcacacctggaacacgggcgcgaccaactgacattggcgggggctggggagctt
ctggctgaagatttgcgccaggctcaacaggcattgggtgaaattacaggagcattcagc
tcggatgacctgcttgggcggatcttctccagtttctgcatcggtaagtaa
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