Pseudomonas sp. VLB120: PVLB_27382
Help
Entry
PVLB_27382 CDS
T02897
Name
(GenBank) putative transposase subunit
Organism
psv
Pseudomonas sp. VLB120
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mu-transpos_C_2
rve
Sigma70_r4_2
HTH_23
Motif
Other DBs
NCBI-ProteinID:
AGZ38213
UniProt:
A0AAN0R8A0
LinkDB
All DBs
Position
pSTY:complement(242174..243688)
Genome browser
AA seq
504 aa
AA seq
DB search
MRKIREVLRLKFDAGLSVRKIATSLRISSGSAGNYLHRFNACGLTWPTALSDAELERCLF
PPAPTVPSDQRPMPDWAHVHAELCRPGVTLALLWQEYRLSHPQGFQYSWFCEHYRLWAAK
VDVVMRQEHRAGEKLFVDYAGQTVPVIDRRTGEIRQTQIFVAVLGASSYTFAEATWSQKL
PDWLGSHVRCFAFLGGTSQILVPDNLRSGVTKAHRYEPDINPSYRDLAEHYGVAVLPARS
RKPRDKAKVEVGVQVVERWILAVLRNRQFFSLGELNTAIGLLLDRLNQKPFKKLPGSRRS
AFEAIDQPALQPLPEHPYIYAEWKKVRVHIDYHVEVDGHFYSVPYQLVKHQLEVRLTAQT
VECFHANQRVASHLRSPHKGRHTTHTEHMPKSHREHAEWTPQRLIRWAEQTGPNTAGVIA
YILERRIHPQHGFRACLGILRLSKQHGEERLEAACQRALALGACSYKSLESILRQGLERL
PLTQQNLPLLPEKHINLRGPDYYH
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaaaatccgagaggtactacgcctaaagttcgacgccggcctgtccgtgcgcaag
atcgccaccagccttcgcatcagcagtggcagcgccggcaactacctgcatcgcttcaac
gcttgcgggctgacctggccgacggcgttgtcggatgccgaactggaacgctgcctgttc
ccgccagcgccgacggttcccagcgatcaacgtccgatgccggactgggctcatgtccat
gccgaactgtgccgtcccggcgtcaccctggccctgctttggcaagagtatcgactcagc
catccgcaaggcttccagtacagctggttctgcgagcattaccgcctctgggccgccaag
gtcgacgtggtcatgcgccaggaacaccgtgccggcgaaaagctgtttgtcgattacgct
ggccagaccgtgccagtcattgatcggcgaaccggcgagatccgccaaacgcagatcttc
gtcgccgtcctcggcgcgtccagctacacctttgccgaggccacctggtcgcagaaactg
cccgactggctgggctcgcacgtgcgctgcttcgcctttttgggcggtacatcgcagatc
ctggtaccggacaatctgcgcagcggcgttaccaaagcgcatcgttacgagcctgacatc
aatcccagttaccgcgacctggccgagcattacggcgtggccgtattgcctgccagatcc
cgcaagcctcgggacaaagccaaggtcgaagtcggcgtgcaagtggtcgagcgctggatc
ctggcagtgctgcgcaatcggcagttcttttcgctgggtgaactcaacacggccatcgga
ctgctgctggatcgcctcaaccaaaagcccttcaaaaagctgcccggctcgcgccgttcg
gccttcgaggccatcgaccaaccggcgttgcaaccgctaccggaacacccttacatctac
gccgagtggaaaaaggtgcgggtgcacatcgactaccacgtcgaggtcgacggtcacttc
tactcggtgccataccaactggtgaagcaccaactcgaagtgcgactgactgcgcagacc
gtcgagtgcttccacgccaaccagcgcgtggccagccatcttcgctcgccgcacaaaggc
cgccacaccacccacaccgagcacatgcccaagagccaccgcgagcacgccgaatggaca
ccgcaacggctgatccgctgggcagagcaaaccgggcccaacaccgctggcgtcatcgcc
tacatcctcgaacgccgaatccacccgcagcatggcttccgcgcctgcctgggcatcctg
cgcctgagcaaacagcacggcgaagagcggctggaagccgcttgccagcgtgcgctggca
ctgggcgcatgtagctacaaaagcctcgaatcgatcctgcgccaaggcttggaaaggctg
ccgctgacccagcaaaacctgccactgctgcccgaaaagcacatcaacctgcgtggcccc
gactactaccactga
DBGET
integrated database retrieval system
