Pseudomonas cremoricolorata: LK03_02520
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Entry
LK03_02520 CDS
T03354
Name
(GenBank) poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
psw
Pseudomonas cremoricolorata
Pathway
psw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LK03_02520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psw03019
]
LK03_02520
Enzymes [BR:
psw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
LK03_02520
Messenger RNA biogenesis [BR:
psw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
LK03_02520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
BenE
Motif
Other DBs
NCBI-ProteinID:
AIR88182
UniProt:
A0A089WNZ4
LinkDB
All DBs
Position
546842..548224
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AA seq
460 aa
AA seq
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MLKKLFQSFRPPVHAQHHRRTTPEVINKSQHSLQRSQFSRHAVGIVERLQSAGYQAYLVG
GCVRDMLLGIAPKDFDVATSATPEQVRAEFRNARIIGRRFKLVHIQFGREIIEVATFRAP
HSDEDQDDKHRSSHHANGRILRDNVYGTLEEDAQRRDFTINALYYDPVSERILDYANGVH
DIRNRLLRLIGDPTHRYQEDPVRMLRAVRFAAKLDFGIEKHTVAPIRELAPLLREIPPAR
LFEESLKLFLSGQGAMVFEMLVDLELFAPLFPASAQALEDRPTYTYTLISQALNNTDLRI
KQGKPVTPAFLFAALLWPALPARVLHLQNQGVPPIPAMNGAAHELIAEQCQRVAVPKRFT
LPIREIWDMQERLPRRSGKRADQLLDNPRFRAGYDFLLLRESAGEQTDDLGQWWTDYQEA
HDGERREMIRDLGSRDDGAAPRKRKRTSSKRKRGGDEVFD
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagaagttgttccagtctttccgccctcccgtccacgctcagcaccatcggcgc
actacgcccgaggtgatcaacaagagccagcactcgctgcaacgcagccagttcagccgc
catgcggtgggcatcgtagagcgcctgcaaagcgcaggctatcaggcttacctggtgggt
ggctgtgttcgcgacatgctcctggggatcgcccccaaggacttcgatgtcgccaccagc
gccaccccggaacaggttcgcgcagagtttcgcaatgcgcggatcatcggccgtcgtttc
aagctcgtgcacatccagttcggtcgcgagatcatcgaagtcgccacattccgtgcgccg
cactcggatgaagaccaggacgacaaacaccgttcgtcgcatcatgccaatgggcgcatc
ctgcgcgacaacgtctacggcaccttggaagaagacgcccagcgccgcgatttcaccatc
aatgcgctgtactacgatccggtcagcgagcgcattctcgattacgccaacggcgtgcac
gacatccgcaatcgcctgctgcgcctgatcggtgatccgacccatcgttaccaggaagat
cccgtgcgcatgctgcgcgcggtgcgtttcgctgccaagctcgacttcggtatcgagaaa
cacaccgtcgcgccgatccgcgagctggcgccgttgctgcgcgagattccaccagcgcgg
ttgttcgaagaaagcctcaaactgtttctctccggccagggcgcgatggtcttcgaaatg
ctggtcgacctggaactgttcgcgccgctgttccccgccagcgcccaggccctggaagat
cgccccacctatacctacacgctgatcagccaggcgctgaacaacaccgacctgcgtatc
aagcagggcaaaccggtgaccccggcgttcctcttcgcagcgctgctgtggcctgccctg
ccagcacgtgtgctgcacctgcagaaccagggcgtgccgccgattccggccatgaacggc
gccgcccacgagctgatcgccgaacagtgccagcgcgtggcggtacccaaacgcttcacc
ctgccgatccgcgagatctgggacatgcaggaacgcctgccgcggcgcagtggcaaacgt
gccgaccagttgctggacaacccacgtttccgcgccggctacgacttcctgctgctgcgc
gagagcgctggcgagcagaccgacgatctcggccaatggtggaccgactatcaggaagcc
cacgacggcgagcgccgcgaaatgatccgtgacctgggcagccgtgatgacggcgccgca
ccgcgcaagcgcaagcgcaccagcagcaagcgcaaacgcggtggcgacgaggtcttcgac
tga
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