Pseudomonas cremoricolorata: LK03_04100
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Entry
LK03_04100 CDS
T03354
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
psw
Pseudomonas cremoricolorata
Pathway
psw00260
Glycine, serine and threonine metabolism
psw00460
Cyanoamino acid metabolism
psw00630
Glyoxylate and dicarboxylate metabolism
psw00670
One carbon pool by folate
psw00680
Methane metabolism
psw01100
Metabolic pathways
psw01110
Biosynthesis of secondary metabolites
psw01120
Microbial metabolism in diverse environments
psw01200
Carbon metabolism
psw01230
Biosynthesis of amino acids
psw01240
Biosynthesis of cofactors
psw04981
Folate transport and metabolism
Module
psw_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
psw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
LK03_04100 (glyA)
09102 Energy metabolism
00680 Methane metabolism
LK03_04100 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LK03_04100 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
LK03_04100 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
LK03_04100 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
LK03_04100 (glyA)
Enzymes [BR:
psw01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
LK03_04100 (glyA)
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
AIR88482
UniProt:
A0A089WPR4
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All DBs
Position
complement(963314..964567)
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AA seq
417 aa
AA seq
DB search
MFSKQDQIQGYDDALLAAMNAEEQRQEDHIELIASENYTSKRVMQAQGSGLTNKYAEGYP
GKRYYGGCEHVDKVEALAIERAKQLFGADYANVQPHSGSSANSAVYLALLQAGDTILGMS
LAHGGHLTHGAKVSSSGKLYNAVQYGIDTNTGLIDYDEVERLAVEHKPKMIVAGFSAYSK
TLDFPRFRAIADKVGALLFVDMAHVAGLVAAGLYPNPIPFADVVTTTTHKTLRGPRGGLI
LAKANEEIEKKLNAAVFPGAQGGPLMHVIAGKAVCFKEALEPGFKAYQQQVIDNAQAMAQ
VFIDRGYDVVSGGTDNHLFLVSLIRQGLTGKDADAALGRAHITVNKNAVPNDPQSPFVTS
GLRIGTPAVTTRGFKVAQCKELAGWICDILDHLGDADIEADVAKRVSALCADYPVYR
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagcaagcaagaccagatccaaggttatgacgacgcactgctggcggcgatgaat
gccgaggaacagcgtcaggaagatcacatcgaactgatcgcctcggaaaactacaccagc
aagcgcgtgatgcaggcccaaggcagcggcctgaccaacaagtacgccgaaggctatcca
ggcaagcgttactacggtggttgcgagcacgtcgacaaggtcgaggcgctggccatcgag
cgcgccaagcagctgttcggtgccgactacgccaacgtccagccgcactccggttcctcg
gccaacagcgccgtgtacctggctctgctgcaggccggcgacaccatcctgggcatgagc
ctggcccatggcggtcacctgacccacggcgccaaagtgtcgtcctcgggcaagctgtac
aacgccgttcagtacggcatcgacaccaatactggcctgatcgactacgacgaagtcgag
cgcctggccgtcgagcacaagccgaagatgatcgttgccggcttctcggcgtactccaag
accctcgacttcccacgcttccgcgccatcgctgacaaggtcggtgcgctgttgttcgtc
gacatggcccacgttgcgggtctggtcgctgccggcctgtaccccaacccgattccgttc
gctgacgtggtcaccaccaccacccacaagaccctgcgcggtccacgtggcggtctgatc
ctggccaaggccaacgaagagatcgagaagaagctcaacgctgcggtcttcccgggcgcc
cagggtggcccgctgatgcacgtcatcgccggcaaggcagtgtgctttaaagaagcgctg
gagccaggcttcaaggcctaccagcagcaagtgatcgacaacgcccaggccatggcccag
gtgttcatcgaccgcggctacgacgtggtttccggtggtaccgacaaccacctgttcctg
gtcagcctgatccgtcagggcctgactggcaaagatgccgacgccgccctgggccgtgcg
cacatcaccgtcaacaagaacgccgtacccaacgatccacaatcgccgttcgtgacctcg
ggcctgcgcatcggcaccccggccgtcacgacccgtggcttcaaggtcgcccagtgcaaa
gagctggctggctggatctgcgacatcctcgatcacctgggtgatgcagacatcgaagcc
gacgtggccaagcgcgtctccgccctgtgcgccgattacccggtttaccgctga
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