Pseudomonas cremoricolorata: LK03_04330
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Entry
LK03_04330 CDS
T03354
Name
(GenBank) DNA/RNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
psw
Pseudomonas cremoricolorata
Pathway
psw03420
Nucleotide excision repair
psw03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
psw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LK03_04330
03430 Mismatch repair
LK03_04330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psw03400
]
LK03_04330
Enzymes [BR:
psw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LK03_04330
DNA repair and recombination proteins [BR:
psw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LK03_04330
MMR (mismatch excision repair)
Other MMR factors
LK03_04330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
Viral_helicase1
UvrD_C
UvrD_C_2
AAA_30
AAA_11
PIF1
T2SSE
AAA_16
DEAD
Motif
Other DBs
NCBI-ProteinID:
AIR88525
UniProt:
A0A089WGV3
LinkDB
All DBs
Position
complement(1011728..1013653)
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AA seq
641 aa
AA seq
DB search
MVAQMKNLEGVSEETRKILDAINEGKSFLLSGGAGSGKTYSLVEVITSLVTLKPLARVAC
ITYTNAAVREIESRASHPNLHVSTIHDFLWGVIKHFQIELKEVLLSLINDSDISNFKILD
ANGEPTSLAEIDGDVRYKEYVKFREGIISHSEVIVLANEMFKRYDKLCRILKDCYPYILV
DEYQDTQAEVVDILLTQLTRVGCPNVVGFFGDAMQAIYEEGIGDLDLYKGEGVGQVREIK
KEENRRNPKNIIDLANKLRNDGIFQVPSKDLNAPNMAEDGSVKNGCIQFIYSSNDDVNVV
KRFLGWDFSEPSSAKELNLTHNLIAAKAGFSELMRIYDGDKILEYVRRVKNYIKRSEPDF
ICDGKTFGEVLVGLKSGKVGKTLKNIEPTDGMADYIAEHRAVYDEALGYQYTELASLYVN
KDQLIDDQKSDRGELGRGGGNRDDLIKHLFKIQNNVQLYLEGRFNEFVRITEHAITSKKD
KVRLKEEIVRLSRVDGKTVQQVIDEANAGGIVRIDDRLKLFVESKRYIYNQVAALPFAQF
QKLFEYLEGFTPFSTQHKTKGREFSDVLVVLNNGRWNSYNFDYLFTDRADKESVVSRTRK
ILYVCCTRAKSNLALFYHSPSEAVIQKAKVWFGDENVTSLD
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atggttgcgcaaatgaaaaatttagagggcgttagtgaagagactagaaagattttagat
gctatcaatgagggcaagagttttttactgagtggtggtgctggaagtggaaaaacatat
tctttggtagaggttataacgagcttggttaccctcaagcctttagcgcgcgtagcgtgt
ataacctacaccaacgcggcggtccgggagattgagagtagagccagtcatccaaatcta
cacgtttctacgatacatgactttctttggggagtaattaagcacttccaaattgagcta
aaagaagttctgttatcgctgattaatgacagtgatatatcaaatttcaaaattttggat
gctaacggcgaaccgacaagcttggctgaaattgatggggatgttaggtataaggagtac
gtaaaatttagggaggggattatttctcatagtgaggttatcgttcttgctaatgagatg
tttaaacgatatgacaaattatgtagaattctgaaagattgctatccatatattcttgtg
gatgaatatcaggacactcaggctgaggttgtggacatacttctcacacagctgactaga
gtcggatgcccaaatgttgttgggtttttcggcgatgcaatgcaagcaatttatgaggaa
ggtataggggatttagatttatacaaaggggagggtgttgggcaggtaagggaaataaag
aaagaagaaaacaggaggaacccaaaaaatataatcgatttggcaaacaaacttagaaat
gatgggatttttcaagttccttctaaagacttgaatgctcccaatatggccgaggacgga
agtgtaaagaacggatgcatacagtttatatactcttcgaatgatgatgttaatgttgta
aagagatttcttggctgggacttttccgaaccttcaagcgcgaaagagctgaatcttacc
cataacctaatcgctgcaaaggcaggcttcagtgagttaatgagaatttatgatggtgac
aagattttagagtatgtccgtagagtaaaaaactatattaagaggagtgagcctgatttc
atctgtgatgggaaaacatttggagaagttttagtcggtttgaagagtgggaaggtaggt
aaaaccttaaaaaacattgagcccactgatggcatggcggattatatcgcggagcatcga
gccgtatatgatgaagcgctgggctaccaatatactgagcttgcttctctatatgtgaat
aaggaccagctaatagatgatcagaaatcagatagaggggagttggggcgtggcggtggt
aacagagatgatcttataaagcatttatttaaaatacaaaacaatgttcagttgtacttg
gaggggagattcaacgagtttgttcggataactgagcatgccattacgtcgaaaaaagat
aaagttaggttgaaagaggagattgtaaggttatctagggtcgacggcaaaacggtccag
caagtcatcgatgaagctaatgctgggggaatcgttagaattgatgatcgtcttaagtta
tttgttgaatcaaaacgctatatttataatcaagttgccgcgcttccatttgcacaattt
caaaagctatttgaatatcttgaggggtttacacccttttctactcagcataaaaccaaa
ggtagagagttttccgatgttctagttgttctcaataatggtcggtggaattcctataat
tttgactatctgttcactgatcgtgcggataaagagagtgtggtaagccgtacgcgaaaa
attctgtatgtttgttgcacccgtgcgaagtcaaatttagcattgttttatcattcgcca
tctgaagccgttattcagaaggcgaaggtttggtttggagatgaaaatgttacaagtcta
gattga
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