Pseudomonas cremoricolorata: LK03_04730
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Entry
LK03_04730 CDS
T03354
Name
(GenBank) type VI secretion protein
KO
K11893
type VI secretion system protein ImpJ
Organism
psw
Pseudomonas cremoricolorata
Pathway
psw02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
psw00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
LK03_04730
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
psw02044
]
LK03_04730
Secretion system [BR:
psw02044
]
Type VI secretion system
Imp/Vas secretion system core components
LK03_04730
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Gene cluster
GFIT
Motif
Pfam:
T6SS_VasE
Motif
Other DBs
NCBI-ProteinID:
AIR88603
UniProt:
A0A089Y9V4
LinkDB
All DBs
Position
complement(1106324..1107658)
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AA seq
444 aa
AA seq
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MSWNNRVVWSEGMFLTTQHFQQQDRYLENLIDARSRPLHAAAWGFSELLIDQGLLSQGKL
AILAARGLLPDGTPFDIPRDDLPPPPLEIPEDLRDGVIYLGLALKRAGARDTVDEGEAQE
GARYVSRVSEVRDDNAAFENRAPLALGSRALRLLRAEDGLSDHAALGVVRIRERRADRAL
SLDDSYIPPLLDVAANPALSSFRSELLGLLHQRGEALAGRVVASANGGASEIADFMLLQL
VNRAQPLIEHLNQLSPLHPERLYSELLALAGEFATFCSEARRPHSFPMYQHDDLAATFAP
VTAALREALSMLIDSKAVAIPIVEKAYGIHVAMLADRSLLDSASFILVVRADVPSETLRS
RFGQQSKIGSVERIRDLVNLQLPGIGLLPLPVAPRQIPFHAGSTYFELDRGSEQWQMLQS
SGGFAFYVAGEFPGLELAFWAIRG
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgtcctggaacaatcgtgtcgtctggtcggaagggatgttcctcaccacccagcatttc
cagcagcaagaccgctacctggaaaacctcatcgacgcccgcagccgcccgctgcacgcc
gcggcctggggtttttccgagctgctgatcgatcagggcttgctcagccagggcaagctg
gcgatcctcgccgcccgtggcctgctgcccgatggcacaccgttcgacattccccgtgac
gacctgccgccgccaccgctggagatccccgaagacctgcgcgacggcgtcatctacctg
ggcctggcgctcaagcgcgccggtgcccgcgacaccgtcgatgaaggcgaggcgcaggaa
ggcgcgcgctatgtcagccgggtcagcgaagtgcgcgacgacaatgccgcttttgaaaac
cgtgcgccgctggccctgggcagccgtgccctgcgcctgctgcgtgccgaggatggcctg
agcgatcacgcagccctcggtgtggtgcggattcgcgagcgccgcgccgatcgtgccctg
tcactggatgacagctacatcccgccgttgctggacgttgccgccaacccggcgctgtcg
agctttcgcagtgaactgctgggcctgctgcatcagcgcggcgaagccctggccgggcgc
gtggtggcctcggccaacggtggcgcttcggaaatcgccgacttcatgctcctgcaactg
gtcaaccgcgcccagccgctgatcgaacacctcaaccagctcagcccgctgcatcccgag
cgcctgtacagcgagctgctggcattggccggtgagttcgccaccttctgcagcgaagcg
cgccgcccgcatagctttcccatgtaccagcacgacgacctggccgcgaccttcgcgccg
gtcactgcggcgctacgtgaggcgctgtcgatgctgatcgacagtaaggcggtggcgatt
cccatcgtcgagaaggcctacggcatccatgtggcgatgctcgccgaccgcagcctgctc
gacagcgccagtttcattctggtggtgcgcgccgatgtgcccagcgaaaccctgcgcagc
cgcttcggccagcagagcaagatcggctcggtggagcgcatccgcgacctggtcaatctg
caactgccgggcattggcctgctgccattgccggtggcgccgcggcagattccgttccac
gccggctcgacctacttcgaactcgaccgcggcagcgagcagtggcagatgctgcaaagc
tcgggcggcttcgccttctacgtggccggcgagttcccgggcctggaactggccttctgg
gccattcgagggtga
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