Pseudomonas cremoricolorata: LK03_05580
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Entry
LK03_05580 CDS
T03354
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
psw
Pseudomonas cremoricolorata
Pathway
psw03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
psw00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LK03_05580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psw03021
]
LK03_05580
03400 DNA repair and recombination proteins [BR:
psw03400
]
LK03_05580
Enzymes [BR:
psw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LK03_05580
Transcription machinery [BR:
psw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LK03_05580
DNA repair and recombination proteins [BR:
psw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LK03_05580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Gp45_2
Motif
Other DBs
NCBI-ProteinID:
AIR88767
UniProt:
A0A089WQL5
LinkDB
All DBs
Position
1290723..1290986
Genome browser
AA seq
87 aa
AA seq
DB search
MARVTVEDCLEHVDNRFELVMLSTKRARQLATGGKEPRVAWENDKPTVVALREIAEGIIT
EDFLAAEEIVTEDPVFAAFEDESNEAV
NT seq
264 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcgtaaccgtcgaagattgccttgaacacgtggacaaccgctttgagctggta
atgctgtccaccaaacgcgcgcgccaattggccaccggcggcaaagagccgcgcgtggcg
tgggaaaacgacaaacccaccgtcgttgccctgcgcgaaatcgccgaaggcatcatcact
gaagacttccttgccgccgaagaaatcgtcaccgaagatccggtcttcgccgccttcgag
gacgagtccaacgaggccgtctga
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