Pseudomonas cremoricolorata: LK03_05785
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Entry
LK03_05785 CDS
T03354
Symbol
uvrD
Name
(GenBank) DNA-dependent helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
psw
Pseudomonas cremoricolorata
Pathway
psw03420
Nucleotide excision repair
psw03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
psw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LK03_05785 (uvrD)
03430 Mismatch repair
LK03_05785 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psw03400
]
LK03_05785 (uvrD)
Enzymes [BR:
psw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LK03_05785 (uvrD)
DNA repair and recombination proteins [BR:
psw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LK03_05785 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
LK03_05785 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_12
Viral_helicase1
AAA_22
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AIR88807
UniProt:
A0A089WQQ2
LinkDB
All DBs
Position
1334922..1337105
Genome browser
AA seq
727 aa
AA seq
DB search
MHNDDLSLLLNSLNDAQRQAVAAQVGRQLVLAGAGSGKTRVLVHRIAWLIQVEHASPHSI
LSVTFTNKAAAEMRQRIEQLLGINPAGMWVGTFHGLAHRLLRAHWQEARLVQNFQILDSD
DQQRLIKRVMRELGLDEQKWPARQAQWFINGQKDEGLRPQHIQAGGDLFLTTMREVYSAY
ELACERAGVIDFSELLLRALDLWRDNPSLLEHYQRRFRHLLVDEFQDTNAVQYAWLRMLA
AGGDSLMAVGDDDQSIYGWRGAKIENIHQYTADFPDAELIRLEQNYRSTGGILKAANALI
VNNSGRLGKELWTDMGEGEPLTLYAAYNEHDEARYVVETIESVIKQGSARNDIAILYRSN
AQSRVLEEALLRERIPYRIYGGQRFFERAEIKNAMAYLRLIEGRGNDAALERVINVPPRG
IGEKTVEAIRAHARHSQLSMWEALCQLLAGKGLKGRAASALGAFVELIDNLATKVAEMPL
HLMTQTVIEQSGLIPYHQEEKGEKGQARVENLEELVSAARNFEPGAEDAELTELAAFLGH
ASLEAGDTQAEEHEDSVQLMTLHSAKGLEFPHVFLVGMEEGLFPHKMSLEEPGRLEEERR
LAYVGITRAMRQLVMTYAETRRLYGSETYNKVSRFVREIPGGLIQEVRLSNSVSRPFGAS
QPQNSKLFANESIPQTAFTLGQRVQHSVFGEGTILNFEGSGAQARVQVNFAEGSKWLMLG
YAKLEAI
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgcacaatgacgacctctccctcctgctgaactccctcaacgatgctcaacgccaggcc
gtagccgcccaggtggggcgtcaactggtgcttgccggtgccggctcgggcaagacccgc
gtgctggtgcatcgtatcgcctggctgatccaggtcgagcatgcctcgccgcactcgatc
ctgtcggtgaccttcaccaacaaggccgcggccgagatgcgtcagcgtatcgagcagctg
ctgggcatcaacccggcgggcatgtgggtcggtaccttccacggcctggcccatcgcctg
ttgcgagcgcactggcaggaagcacgcctggtgcagaacttccagattctcgacagcgac
gatcagcagcgattgatcaagcgggtcatgcgcgagctgggtctggatgagcagaagtgg
ccggcgcgccaggctcagtggttcatcaacgggcaaaaggatgagggcctgcgtccacag
cacatccaggccggtggcgacctgttcctgactaccatgcgcgaggtctacagcgcctac
gagctggcctgcgaacgcgctggcgtcatcgatttttccgagctgctgctgcgcgcgctc
gacctgtggcgcgacaaccccagcctgctcgagcactaccagcgccgcttccgtcacttg
ctggtcgacgaattccaggacaccaacgccgtgcagtacgcctggctgcgcatgctggcg
gccggcggtgacagcctcatggcggtgggcgatgacgaccagtcgatctacggctggcgc
ggcgcgaagatcgaaaacatccaccagtacacggccgacttccccgatgccgagctgatc
cgcctcgagcagaactaccgctccactggcggcatcctcaaggcggccaacgcgctgatc
gtcaacaacagcgggcgcctgggcaaagagctgtggaccgacatgggtgaaggcgagccg
ctgacgctctacgccgcctacaacgaacacgacgaagcacgctatgtggtcgagaccatc
gaaagcgtgatcaagcaaggcagcgcgcgcaacgatatcgccattctgtaccgctccaac
gcccagtcccgggtgctcgaagaggcgttgctgcgcgagcgcattccctatcgaatctac
ggtgggcaacgcttcttcgagcgcgccgaaatcaagaacgccatggcctacctgcggctg
atcgaagggcgtggcaacgatgcggcgctggagcgggtgatcaacgtgccgccgcggggc
atcggcgaaaagaccgtcgaggccattcgcgcccatgcccgtcatagccaattgtcgatg
tgggaagccctgtgccagttgctcgccggcaagggcctcaagggccgtgcggcgagcgcg
ctgggcgctttcgtcgagctgatcgacaacctcgcgacgaaggtcgccgagatgccattg
cacctgatgacccagaccgtcatcgagcaatccgggctgattccctatcaccaggaagaa
aaaggtgagaaaggtcaggcacgggtggaaaaccttgaggaactggtcagcgcagcgcgc
aacttcgagcccggcgccgaggatgccgagttgaccgaactggcggctttcctcggccac
gcctccctcgaagccggggatacccaggccgaagagcacgaagacagcgtgcaattgatg
accctgcatagcgccaaaggcctggaattcccccacgtcttcctggtgggcatggaggaa
ggcctgtttccgcacaagatgagcctggaagagccgggccgcctggaagaagaacgtcgc
ctggcttatgtcggcattacccgtgccatgcgccaactggtgatgacctacgctgaaact
cggcgcctgtacggcagcgaaacctacaacaaggtgtcgcgtttcgttcgcgagatccca
ggtgggctgatccaggaggtccgcctgtccaactcggtgagccggccattcggtgcctcg
cagccgcagaacagcaagctgttcgccaatgaaagcattccccagactgccttcaccctg
ggtcaacgcgtgcagcactcggtattcggcgaaggcaccattctcaacttcgagggctcc
ggcgcgcaggcacgggtgcaggtcaacttcgccgagggcagcaagtggttgatgctcggc
tatgccaagctcgaagcgatttga
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