Pseudomonas cremoricolorata: LK03_06240
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Entry
LK03_06240 CDS
T03354
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
psw
Pseudomonas cremoricolorata
Brite
KEGG Orthology (KO) [BR:
psw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psw03032
]
LK03_06240 (gyrB)
03400 DNA repair and recombination proteins [BR:
psw03400
]
LK03_06240 (gyrB)
Enzymes [BR:
psw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
LK03_06240 (gyrB)
DNA replication proteins [BR:
psw03032
]
Prokaryotic type
DNA Topoisomerases
LK03_06240 (gyrB)
DNA repair and recombination proteins [BR:
psw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LK03_06240 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
AIR88888
UniProt:
A0A089YAN4
LinkDB
All DBs
Position
1452952..1455372
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AA seq
806 aa
AA seq
DB search
MSENQTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVFEVVDNSIDEALAGHCDD
ITVIIHPDESISVRDNGRGIPVDVHKEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGV
GVSVVNALSEKLILTVRRSGKIWEQTYVHGVPQEPMAIVGESETTGTHIHFKPSAETFKN
IHFSWDILAKRIRELSFLNSGVGILLKDERSGKEEFFKYEGGLRAFVEYLNTNKTPVNSQ
VFHFTVQREDGVGVEVALQWNDSFNENLLCFTNNIPQRDGGTHLVGFRSSLTRSLNNYIE
QEGLAKKNKVSTTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMNKYFS
DFLLENPNEAKAVVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPALS
ELYLVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARFDKMISSQEVGTLITALGCGI
GREEYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQLPELVERGYIYIAQPPLYKVK
KGKHEQYIKDDEAMEEYMTQSALEDASLHLDESAPPVSGMQLESLVNDFRAVMKTLKRLS
RLYPEELTEHFIYMSEVTQEQLGNHEHMQAWLANYQSRLDQSQKSGLAYKASLREDKERN
VWLPEVQIISHGLASYVTFNRDFFGSNDYRSVVNIGNKLSTLLGEGAYVKRGERRKAVTE
FKEALDWLMNESTKRHTIQRYKGLGEMNPDQLWETTMDPAVRRMLKVTIEDAIGADQLFN
TLMGDAVEPRRDFIESNALSVSNLDF
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaaatcaaacgtacgactcttccagcatcaaggtgttgaaagggctggatgcc
gtgcgcaagcgtcccggcatgtacattggcgataccgatgatggcagcggcctccaccac
atggtgttcgaagtagtcgataactctatcgacgaggcgttggcgggacactgtgacgac
atcaccgtcatcatccatcctgacgaatccatcagcgtccgagacaacggtcggggtatt
ccggtcgatgtccataaagaagaaggtgtgtctgcggcagaggtcatcatgaccgtgctg
cacgccggcggtaagttcgacgacaactcctataaagtttccggcggcctgcacggcgta
ggtgtttcggtggtcaacgccctgtccgagaagttgatcctgaccgtgcgccgcagcggc
aagatttgggaacagacctacgtccacggtgttccccaggaaccgatggcgatcgtgggc
gaaagcgaaaccaccggtacccatatccatttcaaaccgtcggcagagacattcaagaac
atccacttcagctgggacattcttgccaaacgtatccgcgagctgtcgttcctcaactcg
ggcgttggcattctgctgaaggacgagcgtagcggtaaggaagagttcttcaagtatgaa
ggtggcttgcgtgcgttcgtcgagtacctgaataccaacaagaccccagtcaactcgcag
gtgttccacttcaccgtacagcgcgaagacggcgtgggtgtcgaagtggccctgcagtgg
aacgatagcttcaacgaaaacctgctgtgcttcaccaacaacattccgcagcgtgacggc
ggtacccacttggtcggcttccgctcttccttgacccgtagcctgaacaactacatcgag
caggaaggtctggcgaagaagaacaaggtttccaccaccggtgacgatgcgcgtgagggc
ctgacggcgatcatctcggtcaaagtcccggaccccaagttcagctctcagaccaaggac
aaactggtgtcgtcggaggtgaaaaccgccgtcgagcaggagatgaacaagtacttctcc
gacttcctgctggagaaccccaacgaggccaaagcagtcgtcggcaagatgatcgatgca
gcgcgtgcgcgtgaagccgcccgtaaggcacgtgagatgactcgccgtaaaggcgctctg
gatatcgcaggtctgccgggcaaattggccgactgccaggaaaaggaccctgccctctcc
gaactgtatctggtggagggtgactcggcaggcggatcggcgaagcaaggccgcaaccgt
cgtacccaggcgattctgccgctcaagggcaagatcctcaacgtcgagaaagcccgcttc
gacaagatgatttcgtcacaggaagtcggcacgctgatcactgcgctgggctgcggtatt
ggccgtgaagagtacaacatcgacaaattgcgttatcacaacatcatcatcatgaccgat
gctgacgtcgacggctctcacatccgtaccctgctgctgaccttcttcttccgccaactg
cccgagctggtcgagcgtggctatatctacattgcccaaccaccgctgtataaggtgaag
aaaggcaagcacgagcagtacatcaaggacgatgaggccatggaggagtacatgacccag
tcggcgctcgaagatgccagcctgcacttggacgagtcggcgccaccggtatcgggcatg
caactggaaagcctggtcaatgacttccgcgctgtgatgaagacgctcaagcgtctgtct
cgcctgtaccccgaagaactgaccgagcacttcatctacatgagcgaagtgacccaggaa
cagttgggcaaccatgagcacatgcaagcctggttggccaattaccagtcgcgcctcgat
caaagtcagaagtccggcctggcctacaaagccagcctgcgtgaagacaaggaacgtaac
gtctggttgcctgaagtgcagatcatctctcacggactggccagctacgtcaccttcaac
cgcgacttcttcggcagcaacgactaccgctcggtggtcaatatcggcaacaagctcagc
accctgctcggcgaaggtgcctatgtgaagcgtggtgagcgtcgcaaggcagtgaccgag
ttcaaggaagcgctggactggctgatgaacgagtcgaccaagcgccacaccatccagcgc
tacaaaggcctgggcgagatgaacccggatcagttgtgggaaaccaccatggacccggcc
gtgcgtcgcatgctcaaggtcaccatcgaagatgccattggtgctgaccagctgttcaac
accctgatgggcgacgcagtcgaaccgcgtcgtgacttcatcgaaagtaacgcgctgtcg
gtgtcgaacctggacttttga
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